2XQY

CRYSTAL STRUCTURE OF PSEUDORABIES CORE FRAGMENT OF GLYCOPROTEIN H IN COMPLEX WITH FAB D6.3

2XQY の概要

• エントリーDOI: 10.2210/pdb2xqy/pdb
• 分子名称: ENVELOPE GLYCOPROTEIN H, A13-D6.3 MONOCLONAL ANTIBODY, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (6 entities in total)
• 機能のキーワード: immune system-viral protein complex, envelope protein, immune system/viral protein
• 由来する生物種: SUID HERPESVIRUS (PSEUDORABIES VIRUS); 詳細
• 細胞内の位置: Virion membrane; Single-pass membrane protein (Potential): P27416
• タンパク質・核酸の鎖数: 6
• 化学式量合計: 227879.06

構造登録者

Backovic, M.,Dubois, R.,Cockburn, J.,Sharff, A.,Vaney, M.,Granzow, H.,Klupp, B.,Bricogne, G.,Mettenleiter, T.,Rey, F. (登録日: 2010-09-08, 公開日: 2010-12-22, 最終更新日: 2024-11-06)

主引用文献

Backovic, M.,Dubois, R.M.,Cockburn, J.J.,Sharff, A.J.,Vaney, M.C.,Granzow, H.,Klupp, B.G.,Bricogne, G.,Mettenleiter, T.C.,Rey, F.A.
Structure of a Core Fragment of Glycoprotein H from Pseudorabies Virus in Complex with Antibody.
Proc.Natl.Acad.Sci.USA, 107:22635-, 2010

PubMed Abstract: Compared with many well-studied enveloped viruses, herpesviruses use a more sophisticated molecular machinery to induce fusion of viral and cellular membranes during cell invasion. This essential function is carried out by glycoprotein B (gB), a class III viral fusion protein, together with the heterodimer of glycoproteins H and L (gH/gL). In pseudorabies virus (PrV), a porcine herpesvirus, it was shown that gH/gL can be substituted by a chimeric fusion protein gDgH, containing the receptor binding domain (RBD) of glycoprotein D fused to a truncated version of gH lacking its N-terminal domain. We report here the 2.1-Å resolution structure of the core fragment of gH present in this chimera, bound to the Fab fragment of a PrV gH-specific monoclonal antibody. The structure strongly complements the information derived from the recently reported structure of gH/gL from herpes simplex virus type 2 (HSV-2). Together with the structure of Epstein-Barr virus (EBV) gH/gL reported in parallel, it provides insight into potentially functional conserved structural features. One feature is the presence of a syntaxin motif, and the other is an extended "flap" masking a conserved hydrophobic patch in the C-terminal domain, which is closest to the viral membrane. The negative electrostatic surface potential of this domain suggests repulsive interactions with the lipid heads. The structure indicates the possible unmasking of an extended hydrophobic patch by movement of the flap during a receptor-triggered conformational change of gH, exposing a hydrophobic surface to interact with the viral membrane during the fusion process.

PubMed: 21149698
DOI: 10.1073/PNAS.1011507107

実験手法

X-RAY DIFFRACTION (2.05 Å)