2Q3Y

Ancestral Corticiod Receptor in Complex with DOC

Summary for 2Q3Y

• Entry DOI: 10.2210/pdb2q3y/pdb
• Related: 2Q1H 2Q1V
• Descriptor: Ancestral Corticiod Receptor, Nuclear receptor 0B2, DESOXYCORTICOSTERONE, ... (5 entities in total)
• Functional Keywords: nuclear receptor, mineralocoticiod, ligand binding domain, doc, cortisol, evolution, transcription
• Biological source: unidentified
• Cellular location: Nucleus: Q15466
• Total number of polymer chains: 2
• Total formula weight: 30406.27

Authors

Ortlund, E.A.,Bridgham, J.T.,Redinbo, M.R.,Thornton, J.W. (deposition date: 2007-05-30, release date: 2007-09-04, Last modification date: 2024-04-03)

Primary citation

Ortlund, E.A.,Bridgham, J.T.,Redinbo, M.R.,Thornton, J.W.
Crystal structure of an ancient protein: evolution by conformational epistasis
Science, 317:1544-1548, 2007

PubMed Abstract: The structural mechanisms by which proteins have evolved new functions are known only indirectly. We report x-ray crystal structures of a resurrected ancestral protein-the approximately 450 million-year-old precursor of vertebrate glucocorticoid (GR) and mineralocorticoid (MR) receptors. Using structural, phylogenetic, and functional analysis, we identify the specific set of historical mutations that recapitulate the evolution of GR's hormone specificity from an MR-like ancestor. These substitutions repositioned crucial residues to create new receptor-ligand and intraprotein contacts. Strong epistatic interactions occur because one substitution changes the conformational position of another site. "Permissive" mutations-substitutions of no immediate consequence, which stabilize specific elements of the protein and allow it to tolerate subsequent function-switching changes-played a major role in determining GR's evolutionary trajectory.

PubMed: 17702911
DOI: 10.1126/science.1142819

Experimental method

X-RAY DIFFRACTION (2.4 Å)