2PCW
Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA
Summary for 2PCW
| Entry DOI | 10.2210/pdb2pcw/pdb |
| Related | 2PCV |
| Descriptor | U65 box H/ACA snoRNA, rRNA substrate of U65 box H/ACA snoRNA (2 entities in total) |
| Functional Keywords | box h/aca snorna, pseudouridylation pocket, rrna, rna |
| Total number of polymer chains | 2 |
| Total formula weight | 15729.45 |
| Authors | Jin, H.,Loria, J.P.,Moore, P.B. (deposition date: 2007-03-30, release date: 2007-05-08, Last modification date: 2024-05-22) |
| Primary citation | Jin, H.,Loria, J.P.,Moore, P.B. Solution structure of an rRNA substrate bound to the pseudouridylation pocket of a box H/ACA snoRNA. Mol.Cell, 26:205-215, 2007 Cited by PubMed Abstract: Base pairing between the RNA components of box H/ACA small nucleolar ribonucleoproteins (snoRNPs) and sequences in other eukaryotic RNAs target specific uridines for pseudouridylation. An RNA called HJ1 has been developed that interacts with the rRNA sequence targeted by the 5' pseudouridylation pocket of human U65 snoRNA the same way as intact U65 snoRNA. Sequences on both strands of the analog of the U65 snoRNP pseudouridylation pocket in HJ1 pair with its substrate sequence, and the resulting complex, called HJ3, is strongly stabilized by Mg(2+). The solution structure of HJ3 reveals an Omega-shaped RNA interaction motif that has not previously been described, which is likely to be common to all box H/ACA snoRNP-substrate complexes. The topology of the complex explains why the access of substrate sequences to snoRNPs is facile and how uridine selection may occur when these complexes form. PubMed: 17466623DOI: 10.1016/j.molcel.2007.03.014 PDB entries with the same primary citation |
| Experimental method | SOLUTION NMR |
Structure validation
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