2P24

I-Au/MBP125-135

2P24 の概要

• エントリーDOI: 10.2210/pdb2p24/pdb
• 関連するPDBエントリー: 2P1Y
• 分子名称: H-2 class II histocompatibility antigen, A-U alpha chain, H-2 class II histocompatibility antigen, A-U beta chain (3 entities in total)
• 機能のキーワード: mhc, i-au, immunoglobulin fold, mbp, immune system
• 由来する生物種: Mus musculus (house mouse); 詳細
• 細胞内の位置: Membrane; Single-pass type I membrane protein (Potential): P14438 P06344
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 56097.88

構造登録者

McBeth, C.,Strong, R.K. (登録日: 2007-03-06, 公開日: 2008-01-15, 最終更新日: 2024-10-30)

主引用文献

McBeth, C.,Seamons, A.,Pizarro, J.C.,Fleishman, S.J.,Baker, D.,Kortemme, T.,Goverman, J.M.,Strong, R.K.
A new twist in TCR diversity revealed by a forbidden alphabeta TCR.
J.Mol.Biol., 375:1306-1319, 2008

PubMed Abstract: We report crystal structures of a negatively selected T cell receptor (TCR) that recognizes two I-A(u)-restricted myelin basic protein peptides and one of its peptide/major histocompatibility complex (pMHC) ligands. Unusual complementarity-determining region (CDR) structural features revealed by our analyses identify a previously unrecognized mechanism by which the highly variable CDR3 regions define ligand specificity. In addition to the pMHC contact residues contributed by CDR3, the CDR3 residues buried deep within the V alpha/V beta interface exert indirect effects on recognition by influencing the V alpha/V beta interdomain angle. This phenomenon represents an additional mechanism for increasing the potential diversity of the TCR repertoire. Both the direct and indirect effects exerted by CDR residues can impact global TCR/MHC docking. Analysis of the available TCR structures in light of these results highlights the significance of the V alpha/V beta interdomain angle in determining specificity and indicates that TCR/pMHC interface features do not distinguish autoimmune from non-autoimmune class II-restricted TCRs.

PubMed: 18155234
DOI: 10.1016/j.jmb.2007.11.020

実験手法

X-RAY DIFFRACTION (2.15 Å)