2IXP

Crystal structure of the Pp2A phosphatase activator Ypa1 PTPA1 in complex with model substrate

Summary for 2IXP

• Entry DOI: 10.2210/pdb2ixp/pdb
• Related: 2IXN 2IXO
• Related PRD ID: PRD_000352
• Descriptor: SERINE/THREONINE-PROTEIN PHOSPHATASE 2A ACTIVATOR 1, SIN-ALA-ALA-PRO-LYS-NIT, SULFATE ION, ... (4 entities in total)
• Functional Keywords: pp2a phosphatase activator prolyl isomerase ptpa, prolyl containing peptide substrate analog, nuclear protein, isomerase-isomerase inhibitor complex, isomerase/isomerase inhibitor
• Biological source: SACCHAROMYCES CEREVISIAE (BAKER'S YEAST); More
• Total number of polymer chains: 8
• Total formula weight: 152737.53

Authors

Leulliot, N.,Vicentini, G.,Jordens, J.,Quevillon-Cheruel, S.,Schiltz, M.,Barford, D.,Van Tilbeurgh, H.,Goris, J. (deposition date: 2006-07-09, release date: 2006-07-31, Last modification date: 2023-12-13)

Primary citation

Leulliot, N.,Vicentini, G.,Jordens, J.,Quevillon-Cheruel, S.,Schiltz, M.,Barford, D.,van Tilbeurgh, H.,Goris, J.
Crystal structure of the PP2A phosphatase activator: implications for its PP2A-specific PPIase activity.
Mol. Cell, 23:413-424, 2006

PubMed Abstract: PTPA, an essential and specific activator of protein phosphatase 2A (PP2A), functions as a peptidyl prolyl isomerase (PPIase). We present here the crystal structures of human PTPA and of the two yeast orthologs (Ypa1 and Ypa2), revealing an all alpha-helical protein fold that is radically different from other PPIases. The protein is organized into two domains separated by a groove lined by highly conserved residues. To understand the molecular mechanism of PTPA activity, Ypa1 was cocrystallized with a proline-containing PPIase peptide substrate. In the complex, the peptide binds at the interface of a peptide-induced dimer interface. Conserved residues of the interdomain groove contribute to the peptide binding site and dimer interface. Structure-guided mutational studies showed that in vivo PTPA activity is influenced by mutations on the surface of the peptide binding pocket, the same mutations that also influenced the in vitro activation of PP2Ai and PPIase activity.

PubMed: 16885030
DOI: 10.1016/j.molcel.2006.07.008

Experimental method

X-RAY DIFFRACTION (2.8 Å)