2FBK

The Crystal Structure of HucR from Deinococcus radiodurans

2FBK の概要

• エントリーDOI: 10.2210/pdb2fbk/pdb
• 分子名称: transcriptional regulator, MarR family, CHLORIDE ION (3 entities in total)
• 機能のキーワード: winged-helix-turn-helix, transcription
• 由来する生物種: Deinococcus radiodurans
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 39545.89

構造登録者

Bordelon, T.,Wilkinson, S.P.,Grove, A.,Newcomer, M.E. (登録日: 2005-12-09, 公開日: 2006-07-04, 最終更新日: 2024-02-14)

主引用文献

Bordelon, T.,Wilkinson, S.P.,Grove, A.,Newcomer, M.E.
The Crystal Structure of the Transcriptional Regulator HucR from Deinococcus radiodurans Reveals a Repressor Preconfigured for DNA Binding.
J.Mol.Biol., 360:168-177, 2006

PubMed Abstract: We report here the 2.3 A resolution structure of the hypothetical uricase regulator (HucR) from Deinococcus radiodurans R1. HucR, a member of the MarR family of DNA-binding proteins, was previously shown to repress its own expression as well as that of a uricase, a repression that is alleviated both in vivo and in vitro upon binding uric acid, the substrate for uricase. As uric acid is a potent scavenger of reactive oxygen species, and as D. radiodurans is known for its remarkable resistance to DNA-damaging agents, these observations indicate a novel oxidative stress response mechanism. The crystal structure of HucR in the absence of ligand or DNA reveals a dimer in which the DNA recognition helices are preconfigured for DNA binding. This configuration of DNA-binding domains is achieved through an apparently stable dimer interface that, in contrast to what is observed in other MarR homologs for which structures have been determined, shows little conformational heterogeneity in the absence of ligand. An additional amino-terminal segment, absent from other MarR homologs, appears to brace the principal helix of the dimerization interface. However, although HucR is preconfigured for DNA binding, the presence of a stacked pair of symmetry-related histidine residues at a central pivot point in the dimer interface suggests a mechanism for a conformational change to attenuate DNA binding.

PubMed: 16750221
DOI: 10.1016/j.jmb.2006.05.005

実験手法

X-RAY DIFFRACTION (2.3 Å)