2DWD

crystal structure of KcsA-FAB-TBA complex in Tl+

Summary for 2DWD

• Entry DOI: 10.2210/pdb2dwd/pdb
• Related: 1K4C 2DWE 2HVJ 2HVK
• Descriptor: ANTIBODY FAB HEAVY CHAIN, ANTIBODY FAB LIGHT CHAIN, Voltage-gated potassium channel, ... (8 entities in total)
• Functional Keywords: potassium channel, membrane protein, tetrabutylammonium, k+, kcsa
• Biological source: Streptomyces lividans; More
• Cellular location: Cell membrane; Multi-pass membrane protein: P0A334
• Total number of polymer chains: 3
• Total formula weight: 59444.58

Authors

Yohannan, S.,Zhou, Y. (deposition date: 2006-08-10, release date: 2007-02-20, Last modification date: 2023-10-25)

Primary citation

Yohannan, S.,Hu, Y.,Zhou, Y.
Crystallographic Study of the Tetrabutylammonium Block to the KcsA K(+) Channel
J.Mol.Biol., 366:806-814, 2007

PubMed Abstract: K(+) channels play essential roles in regulating membrane excitability of many diverse cell types by selectively conducting K(+) ions through their pores. Many diverse molecules can plug the pore and modulate the K(+) current. Quaternary ammonium (QA) ions are a class of pore blockers that have been used for decades by biophysicists to probe the pore, leading to important insights into the structure-function relation of K(+) channels. However, many key aspects of the QA-blocking mechanisms remain unclear to date, and understanding these questions requires high resolution structural information. Here, we address the question of whether intracellular QA blockade causes conformational changes of the K(+) channel selectivity filter. We have solved the structures of the KcsA K(+) channel in complex with tetrabutylammonium (TBA) and tetrabutylantimony (TBSb) under various ionic conditions. Our results demonstrate that binding of TBA or TBSb causes no significant change in the KcsA structure at high concentrations of permeant ions. We did observe the expected conformational change of the filter at low concentration of K(+), but this change appears to be independent of TBA or TBSb blockade.

PubMed: 17196615
DOI: 10.1016/j.jmb.2006.11.081

Experimental method

X-RAY DIFFRACTION (2.6 Å)