2WR4

structure of influenza H2 duck Ontario hemagglutinin with human receptor

Summary for 2WR4

• Entry DOI: 10.2210/pdb2wr4/pdb
• Related: 2WR0 2WR1 2WR2 2WR3 2WR5 2WR7 2WRB 2WRC 2WRD 2WRE 2WRF 2WRG 2WRH
• Related PRD ID: PRD_900046
• Descriptor: HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose (3 entities in total)
• Functional Keywords: viral protein, glycoprotein, envelope protein, liproprotein
• Biological source: UNIDENTIFIED INFLUENZA VIRUS
• Total number of polymer chains: 3
• Total formula weight: 172726.21

Authors

Liu, J.,Stevens, D.J.,Haire, L.F.,Walker, P.A.,Coombs, P.J.,Russell, R.J.,Gamblin, S.J.,Skehel, J.J. (deposition date: 2009-08-29, release date: 2009-09-29, Last modification date: 2024-10-23)

Primary citation

Liu, J.,Stevens, D.J.,Haire, L.F.,Walker, P.A.,Coombs, P.J.,Russell, R.J.,Gamblin, S.J.,Skehel, J.J.
From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957.
Proc.Natl.Acad.Sci.USA, 106:17175-, 2009

PubMed Abstract: The viruses that caused the three influenza pandemics of the twentieth century in 1918, 1957, and 1968 had distinct hemagglutinin receptor binding glycoproteins that had evolved the capacity to recognize human cell receptors. We have determined the structure of the H2 hemagglutinin from the second pandemic, the "Asian Influenza" of 1957. We compare it with the 1918 "Spanish Influenza" hemagglutinin, H1, and the 1968 "Hong Kong Influenza" hemagglutinin, H3, and show that despite its close overall structural similarity to H1, and its more distant relationship to H3, the H2 receptor binding site is closely related to that of H3 hemagglutinin. By analyzing hemagglutinins of potential H2 avian precursors of the pandemic virus, we show that the human receptor can be bound by avian hemagglutinins that lack the human-specific mutations of H2 and H3 pandemic viruses, Gln-226Leu, and Gly-228Ser. We show how Gln-226 in the avian H2 receptor binding site, together with Asn-186, form hydrogen bond networks through bound water molecules to mediate binding to human receptor. We show that the human receptor adopts a very similar conformation in both human and avian hemagglutinin-receptor complexes. We also show that Leu-226 in the receptor binding site of human virus hemagglutinins creates a hydrophobic environment near the Sia-1-Gal-2 glycosidic linkage that favors binding of the human receptor and is unfavorable for avian receptor binding. We consider the significance for the development of pandemics, of the existence of avian viruses that can bind to both avian and human receptors.

PubMed: 19805083
DOI: 10.1073/PNAS.0906849106

Experimental method

X-RAY DIFFRACTION (2.5 Å)