2LDF

Solution structure of the long sarafotoxin srtx-m

2LDF の概要

• エントリーDOI: 10.2210/pdb2ldf/pdb
• 関連するPDBエントリー: 2LDE
• NMR情報: BMRB: 17662
• 分子名称: Sarafotoxin-m (1 entity in total)
• 機能のキーワード: endothelin-like peptide, toxin
• 由来する生物種: Atractaspis microlepidota (snakes)
• 細胞内の位置: Secreted: Q6RY98
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 2910.22

構造登録者

Cordier, F.,Zorba, A.,Hajj, M.,Ducancel, F.,Servent, D.,Delepierre, M. (登録日: 2011-05-24, 公開日: 2011-09-21, 最終更新日: 2024-11-27)

主引用文献

Mourier, G.,Hajj, M.,Cordier, F.,Zorba, A.,Gao, X.,Coskun, T.,Herbet, A.,Marcon, E.,Beau, F.,Delepierre, M.,Ducancel, F.,Servent, D.
Pharmacological and structural characterization of long-sarafotoxins, a new family of endothelin-like peptides: Role of the C-terminus extension.
Biochimie, 94:461-470, 2012

PubMed Abstract: Long-sarafotoxins (l-SRTXs) have recently been identified in both the venom of Atractaspis microlepidota and that of Atractaspis irregularis. They are characterized by different C-terminus extensions that follow the invariant Trp21, which plays a crucial role in endothelin-receptor binding. We initially determined the toxicity and three-dimensional structures of two chemically synthesized l-SRTXs that have different C-terminus extensions, namely SRTX-m (24 aa, including extension "D-E-P") and SRTX-i3 (25 aa, including extension "V-N-R-N"). Both peptides were shown to be highly toxic in mice and displayed the cysteine-stabilized α-helical motif that characterizes endothelins and short-SRTXs, to which a longer C-terminus with variable flexibility is added. To discern the functional and pharmacological consequences of the supplementary amino acids, different chimerical as well as truncated forms of SRTX were designed and synthesized. Thus, we either removed the extra-C-terminal residues of SRTX-m or i3, or grafted the latter onto the C-terminal extremity of a short-SRTX (s-SRTX) (ie. SRTX-b). Our competitive binding assays where SRTXs competed for iodinated endothelin-1 binding to cloned ET(A) and ET(B) receptor subtypes over-expressed in CHO cells, revealed the essential role of the C-terminus extensions for ET-receptor recognition. Indeed, l-SRTXs displayed an affinity three to four orders of magnitude lower as compared to SRTX-b for the two receptor subtypes. Moreover, grafting the C-terminus extension to SRTX-b induced a drastic decrease in affinity, while its removal (truncated l-SRTXs) yielded an affinity for ET-receptors similar to that of s-SRTXs. Furthermore, we established by intracellular Ca(2+) measurements that l-SRTXs, as well as s-SRTXs, display agonistic activities. We thus confirmed in these functional assays the major difference in potency for these two SRTX families as well as the crucial role of the C-terminus extension in their various pharmacological profiles. Finally, one of the chimeric toxin synthesized in this study appears to be one of the most potent and selective ligand of the ET(B) receptor known to date.

PubMed: 21889567
DOI: 10.1016/j.biochi.2011.08.014

実験手法

SOLUTION NMR