2BBX
NMR solution structure of the TSR domain of malaria TRAP protein
Summary for 2BBX
| Entry DOI | 10.2210/pdb2bbx/pdb |
| NMR Information | BMRB: 6865 |
| Descriptor | Thrombospondin-related anonymous protein (1 entity in total) |
| Functional Keywords | elongated three-stranded structure, cell adhesion |
| Biological source | Plasmodium falciparum (malaria parasite P. falciparum) |
| Cellular location | Cell membrane; Single-pass membrane protein (Probable): P16893 |
| Total number of polymer chains | 1 |
| Total formula weight | 5450.02 |
| Authors | Tossavainen, H.,Permi, P.,Kilpelainen, I. (deposition date: 2005-10-18, release date: 2006-08-08, Last modification date: 2024-10-30) |
| Primary citation | Tossavainen, H.,Pihlajamaa, T.,Huttunen, T.K.,Raulo, E.,Rauvala, H.,Permi, P.,Kilpelainen, I. The layered fold of the TSR domain of P. falciparum TRAP contains a heparin binding site. Protein Sci., 15:1760-1768, 2006 Cited by PubMed Abstract: Thrombospondin-related anonymous protein, TRAP, has a critical role in the hepatocyte invasion step of Plasmodium sporozoites, the transmissible form of the parasite causing malaria. The extracellular domains of this sporozoite surface protein interact with hepatocyte surface receptors whereas its intracellular domain acts as a link to the sporozoite actomyosin motor system. Liver heparan sulfate proteoglycans have been identified as potential ligands for TRAP. Proteoglycan binding has been associated with the A- and TSR domains of TRAP. We present the solution NMR structure of the TSR domain of TRAP and a chemical shift mapping study of its heparin binding epitope. The domain has an elongated structure stabilized by an array of tryptophan and arginine residues as well as disulfide bonds. The fold is very similar to those of thrombospondin type-1 (TSP-1) and F-spondin TSRs. The heparin binding site of TRAP-TSR is located in the N-terminal half of the structure, the layered side chains forming an integral part of the site. The smallest heparin fragment capable of binding to TRAP-TSR is a tetrasaccharide. PubMed: 16815922DOI: 10.1110/ps.052068506 PDB entries with the same primary citation |
| Experimental method | SOLUTION NMR |
Structure validation
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