1ZK5

Escherichia coli F17fG lectin domain complex with N-acetylglucosamine

1ZK5 の概要

• エントリーDOI: 10.2210/pdb1zk5/pdb
• 関連するPDBエントリー: 1O9V
• 分子名称: F17G adhesin subunit, 2-acetamido-2-deoxy-beta-D-glucopyranose (3 entities in total)
• 機能のキーワード: lectin, beta sandwich, protein-structure complex, immunoglobulin-like fold, cell adhesion
• 由来する生物種: Escherichia coli
• 細胞内の位置: Fimbrium (By similarity): Q9RH91
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 19081.00

構造登録者

Buts, L.,Wellens, A.,Van Molle, I.,De Genst, E.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J. (登録日: 2005-05-02, 公開日: 2006-05-02, 最終更新日: 2024-11-20)

主引用文献

Buts, L.,Wellens, A.,Van Molle, I.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J.
Impact of natural variation in bacterial F17G adhesins on crystallization behaviour.
Acta Crystallogr.,Sect.D, 61:1149-1159, 2005

PubMed Abstract: Since the introduction of structural genomics, the protein has been recognized as the most important variable in crystallization. Recent strategies to modify a protein to improve crystal quality have included rationally engineered point mutations, truncations, deletions and fusions. Five naturally occurring variants, differing in 1-18 amino acids, of the 177-residue lectin domain of the F17G fimbrial adhesin were expressed and purified in identical ways. For four out of the five variants crystals were obtained, mostly in non-isomorphous space groups, with diffraction limits ranging between 2.4 and 1.1 A resolution. A comparative analysis of the crystal-packing contacts revealed that the variable amino acids are often involved in lattice contacts and a single amino-acid substitution can suffice to radically change crystal packing. A statistical approach proved reliable to estimate the compatibilities of the variant sequences with the observed crystal forms. In conclusion, natural variation, universally present within prokaryotic species, is a valuable genetic resource that can be favourably employed to enhance the crystallization success rate with considerably less effort than other strategies.

PubMed: 16041081
DOI: 10.1107/S0907444905017038

実験手法

X-RAY DIFFRACTION (1.4 Å)