1WR6

Crystal structure of GGA3 GAT domain in complex with ubiquitin

Summary for 1WR6

DescriptorADP-ribosylation factor binding protein GGA3, ubiquitin (3 entities in total)
Functional Keywordsthree-helix bundle, ubiquitin-binding protein, clathrin coat adaptor protein, protein transport-signaling protein complex, protein transport/signaling protein
Biological sourceHomo sapiens (human)
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Cellular locationGolgi apparatus, trans-Golgi network membrane; Peripheral membrane protein Q9NZ52
Total number of polymer chains8
Total molecular weight85133.94
Authors
Kawasaki, M.,Shiba, T.,Shiba, Y.,Yamaguchi, Y.,Matsugaki, N.,Igarashi, N.,Suzuki, M.,Kato, R.,Kato, K.,Nakayama, K.,Wakatsuki, S. (deposition date: 2004-10-12, release date: 2005-06-28, Last modification date: 2011-07-13)
Primary citation
Kawasaki, M.,Shiba, T.,Shiba, Y.,Yamaguchi, Y.,Matsugaki, N.,Igarashi, N.,Suzuki, M.,Kato, R.,Kato, K.,Nakayama, K.,Wakatsuki, S.
Molecular mechanism of ubiquitin recognition by GGA3 GAT domain.
Genes Cells, 10:639-654, 2005
PubMed: 15966896 (PDB entries with the same primary citation)
DOI: 10.1111/j.1365-2443.2005.00865.x
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.6 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.287170.6%7.0%2.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution