Pyruvate Phosphate Dikinase with bound Mg-PEP from Maize

Summary for 1VBH

Descriptorpyruvate,orthophosphate dikinase, MAGNESIUM ION, SULFATE ION, ... (5 entities in total)
Functional Keywordstransferase, maize, riken structural genomics/proteomics initiative, rsgi, structural genomics
Biological sourceZea mays
Cellular locationPlastid, chloroplast  P11155
Total number of polymer chains1
Total molecular weight95583.22
Nakanishi, T.,Nakatsu, T.,Matsuoka, M.,Sakata, K.,Kato, H.,RIKEN Structural Genomics/Proteomics Initiative (RSGI) (deposition date: 2004-02-26, release date: 2005-03-08, Last modification date: 2017-10-04)
Primary citation
Nakanishi, T.,Nakatsu, T.,Matsuoka, M.,Sakata, K.,Kato, H.
Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion
Biochemistry, 44:1136-1144, 2005
PubMed: 15667207 (PDB entries with the same primary citation)
DOI: 10.1021/bi0484522
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.261190.6%1.9%12.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution