1RKD

E. COLI RIBOKINASE COMPLEXED WITH RIBOSE AND ADP

Summary for 1RKD

DescriptorRIBOKINASE, RIBOSE, PHOSPHATE ION, ... (5 entities in total)
Functional Keywordscarbohydrate kinase, ribose, nucleotide binding, transferase
Biological sourceEscherichia coli
Cellular locationCytoplasm P0A9J6
Total number of polymer chains1
Total molecular weight33087.67
Authors
Sigrell, J.A.,Cameron, A.D.,Jones, T.A.,Mowbray, S.L. (deposition date: 1997-11-29, release date: 1998-03-04, Last modification date: 2011-07-13)
Primary citation
Sigrell, J.A.,Cameron, A.D.,Jones, T.A.,Mowbray, S.L.
Structure of Escherichia coli ribokinase in complex with ribose and dinucleotide determined to 1.8 A resolution: insights into a new family of kinase structures.
Structure, 6:183-193, 1998
PubMed: 9519409 (PDB entries with the same primary citation)
DOI: 10.1016/S0969-2126(98)00020-3
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.84 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.207203.9%2.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1rkd
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Molmil generated image of 1rkd
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Molmil generated image of 1rkd
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More Biological unit images

Molmil generated image of 1rkd
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Molmil generated image of 1rkd
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Molmil generated image of 1rkd
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(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1rkd.pdb1.gz [101 KB])