Crystal structure of A-DNA decamer GCGTA(3ME)ACGC, with a modified 5-methyluridine

Summary for 1NZG

Descriptor5'-D(*GP*CP*GP*TP*AP*(3ME)P*AP*CP*GP*C)-3' (2 entities in total)
Functional Keywordsa-dna, 2'-modified oligonucleotides, dna
Total number of polymer chains2
Total molecular weight6352.36
Prhavc, M.,Prakash, T.P.,Minasov, G.,Egli, M.,Manoharan, M. (deposition date: 2003-02-17, release date: 2003-08-26, Last modification date: 2011-11-02)
Primary citation
Prhavc, M.,Prakash, T.P.,Minasov, G.,Cook, P.D.,Egli, M.,Manoharan, M.
2'-O-[2-[2-(N,N-dimethylamino)ethoxy]ethyl] modified oligonucleotides: symbiosis of charge interaction factors and stereoelectronic effects
Org.Lett., 5:2017-2020, 2003
PubMed: 12790517 (PDB entries with the same primary citation)
DOI: 10.1021/ol0340991
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRSRZ outliers0.21770MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution