1MSD

COMPARISON OF THE CRYSTAL STRUCTURES OF GENETICALLY ENGINEERED HUMAN MANGANESE SUPEROXIDE DISMUTASE AND MANGANESE SUPEROXIDE DISMUTASE FROM THERMUS THERMOPHILUS. DIFFERENCES IN DIMER-DIMER INTERACTIONS.

1MSD の概要

• エントリーDOI: 10.2210/pdb1msd/pdb
• 分子名称: MANGANESE SUPEROXIDE DISMUTASE, MANGANESE (II) ION (2 entities in total)
• 機能のキーワード: oxidoreductase (superoxide acceptor)
• 由来する生物種: Homo sapiens (human)
• 細胞内の位置: Mitochondrion matrix: P04179
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 44576.10

構造登録者

Sussman, J.,Wagner, U.G.,Pattridge, K.A.,Ludwig, M.L. (登録日: 1992-11-10, 公開日: 1993-07-15, 最終更新日: 2024-02-14)

主引用文献

Wagner, U.G.,Pattridge, K.A.,Ludwig, M.L.,Stallings, W.C.,Werber, M.M.,Oefner, C.,Frolow, F.,Sussman, J.L.
Comparison of the crystal structures of genetically engineered human manganese superoxide dismutase and manganese superoxide dismutase from Thermus thermophilus: differences in dimer-dimer interaction.
Protein Sci., 2:814-825, 1993

PubMed Abstract: The three-dimensional X-ray structure of a recombinant human mitochondrial manganese superoxide dismutase (MnSOD) (chain length 198 residues) was determined by the method of molecular replacement using the related structure of MnSOD from Thermus thermophilus as a search model. This tetrameric human MnSOD crystallizes in space group P2(1)2(1)2 with a dimer in the asymmetric unit (Wagner, U.G., Werber, M.M., Beck, Y., Hartman, J.R., Frolow, F., & Sussman, J.L., 1989, J. Mol. Biol. 206, 787-788). Refinement of the protein structure (3,148 atoms with Mn and no solvents), with restraints maintaining noncrystallographic symmetry, converged at an R-factor of 0.207 using all data from 8.0 to 3.2 A resolution and group thermal parameters. The monomer-monomer interactions typical of bacterial Fe- and Mn-containing SODs are retained in the human enzyme, but the dimer-dimer interactions that form the tetramer are very different from those found in the structure of MnSOD from T. thermophilus. In human MnSOD one of the dimers is rotated by 84 degrees relative to its equivalent in the thermophile enzyme. As a result the monomers are arranged in an approximately tetrahedral array, the dimer-dimer packing is more intimate than observed in the bacterial MnSOD from T. thermophilus, and the dimers interdigitate. The metal-ligand interactions, determined by refinement and verified by computation of omit maps, are identical to those observed in T. thermophilus MnSOD.

PubMed: 8495200

実験手法

X-RAY DIFFRACTION (3.2 Å)