1KQR

Crystal Structure of the Rhesus Rotavirus VP4 Sialic Acid Binding Domain in Complex with 2-O-methyl-alpha-D-N-acetyl neuraminic acid

1KQR の概要

関連するPDBエントリー1KRI
分子名称VP4, SULFATE ION, 2-O-METHYL-5-N-ACETYL-ALPHA-D- NEURAMINIC ACID, ... (5 entities in total)
機能のキーワードrotavirus, vp4, vp8*, spike protein, outer capsid, sialic acid, hemagglutinin, cell attachment, neutralization antigen, lectin, galectin fold, viral protein
由来する生物種Rhesus rotavirus
細胞内の位置Outer capsid protein VP4: Virion. Outer capsid protein VP8*: Virion. Outer capsid protein VP5*: Virion P12473
ポリマー鎖数1
分子量合計20731.73
構造登録者
Dormitzer, P.R.,Sun, Z.-Y.J.,Wagner, G.,Harrison, S.C. (登録日: 2002-01-07, 公開日: 2002-03-27, 最終更新日: 2011-07-13)
主引用文献
Dormitzer, P.R.,Sun, Z.-Y.J.,Wagner, G.,Harrison, S.C.
The Rhesus Rotavirus VP4 Sialic Acid Binding Domain has a Galectin Fold with a Novel Carbohydrate Binding Site
Embo J., 21:885-897, 2002
PubMed: 11867517 (主引用文献が同じPDBエントリー)
DOI: 10.1093/emboj/21.5.885
MImport into Mendeley
実験手法
X-RAY DIFFRACTION (1.4 Å)
NMR情報
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構造検証レポート

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers1802.1%2.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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