1K5M

Crystal Structure of a Human Rhinovirus Type 14:Human Immunodeficiency Virus Type 1 V3 Loop Chimeric Virus MN-III-2

1K5M の概要

関連するPDBエントリー4rhv
分子名称COAT PROTEIN VP1 (P1D), CHIMERA OF HRV14 COAT PROTEIN VP2 (P1B) AND the V3 loop of HIV-1 gp120, COAT PROTEIN VP3 (P1C), ... (6 entities in total)
機能のキーワードengineered rhinovirus, hiv-1 v3 loop, beta turns, icosahedral virus, virus
由来する生物種Human rhinovirus 14
詳細
細胞内の位置Capsid protein VP0: Virion . Capsid protein VP4: Virion . Capsid protein VP2: Virion . Capsid protein VP3: Virion . Capsid protein VP1: Virion . Protein 2B: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 2C: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 3A: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 3AB: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Viral protein genome-linked: Virion . Protease 3C: Host cytoplasm . Protein 3CD: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . RNA-directed RNA polymerase: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side  P03303 P03303 P03303 P03303
ポリマー鎖数4
分子量合計96377.77
構造登録者
Ding, J.,Smith, A.D.,Geisler, S.C.,Ma, X.,Arnold, G.F.,Arnold, E. (登録日: 2001-10-11, 公開日: 2002-07-17, 最終更新日: 2018-04-18)
主引用文献
Ding, J.,Smith, A.D.,Geisler, S.C.,Ma, X.,Arnold, G.F.,Arnold, E.
Crystal Structure of a Human Rhinovirus that Displays Part of the HIV-1 V3 Loop and Induces Neutralizing Antibodies against HIV-1
Structure, 10:999-1011, 2002
PubMed: 12121655 (主引用文献が同じPDBエントリー)
DOI: 10.1016/S0969-2126(02)00793-1
MImport into Mendeley
実験手法
X-RAY DIFFRACTION (2.7 Å)
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構造検証レポート

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers80.9%5.8%7.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
検証レポート(詳細版)をダウンロード