1F70

REFINED SOLUTION STRUCTURE OF CALMODULIN N-TERMINAL DOMAIN

1F70 の概要

• エントリーDOI: 10.2210/pdb1f70/pdb
• 関連するPDBエントリー: 1CFC 1DMO 1F71
• 分子名称: CALMODULIN (1 entity in total)
• 機能のキーワード: calcium binding, ef hands, four-helix bundle, transport protein
• 由来する生物種: Xenopus laevis (African clawed frog)
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 8454.35

構造登録者

Chou, J.,Li, S.,Bax, A. (登録日: 2000-06-24, 公開日: 2000-09-22, 最終更新日: 2024-05-22)

主引用文献

Chou, J.J.,Li, S.,Bax, A.
Study of conformational rearrangement and refinement of structural homology models by the use of heteronuclear dipolar couplings.
J.Biomol.NMR, 18:217-227, 2000

PubMed Abstract: For an increasing fraction of proteins whose structures are being studied, sequence homology to known structures permits building of low resolution structural models. It is demonstrated that dipolar couplings, measured in a liquid crystalline medium, not only can validate such structural models, but also refine them. Here, experimental 1H-15N, 1Halpha-13Calpha, and 13C'-13Calpha dipolar couplings are shown to decrease the backbone rmsd between various homology models of calmodulin (CaM) and its crystal structure. Starting from a model of the Ca2+-saturated C-terminal domain of CaM, built from the structure of Ca2+-free recoverin on the basis of remote sequence homology, dipolar couplings are used to decrease the rmsd between the model and the crystal structure from 5.0 to 1.25 A. A better starting model, built from the crystal structure of Ca2+-saturated parvalbumin, decreases in rmsd from 1.25 to 0.93 A. Similarly, starting from the structure of the Ca2+-ligated CaM N-terminal domain, experimental dipolar couplings measured for the Ca2+-free form decrease the backbone rmsd relative to the refined solution structure of apo-CaM from 4.2 to 1.0 A.

PubMed: 11142512
DOI: 10.1023/A:1026563923774

実験手法

SOLUTION NMR