1YKV

Crystal structure of the Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene

Summary for 1YKV

Entry DOI	10.2210/pdb1ykv/pdb
Related	1YKQ 1YLS
Descriptor	Diels-Alder ribozyme, (3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE, MAGNESIUM ION, ... (4 entities in total)
Functional Keywords	carbon-carbon bond, catalytic mechanism, diels-alder reaction, ribozyme, rna
Total number of polymer chains	4
Total formula weight	32440.01
Authors	Serganov, A.,Keiper, S.,Malinina, L.,Tereshko, V.,Skripkin, E.,Hobartner, C.,Polonskaia, A.,Phan, A.T.,Wombacher, R.,Micura, R.,Dauter, Z.,Jaschke, A.,Patel, D.J. (deposition date: 2005-01-18, release date: 2005-02-22, Last modification date: 2023-08-23)
Primary citation	Serganov, A.,Keiper, S.,Malinina, L.,Tereshko, V.,Skripkin, E.,Hobartner, C.,Polonskaia, A.,Phan, A.T.,Wombacher, R.,Micura, R.,Dauter, Z.,Jaschke, A.,Patel, D.J. Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation. Nat.Struct.Mol.Biol., 12:218-224, 2005 Cited by PubMed: 15723077 DOI: 10.1038/nsmb906 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (3.3 Å)

Structure validation