8SAX
CryoEM structure of DH270.UCA-CH848.10.17DT
エンティティ
| Entity ID | 鎖名 | 説明 | 種類 | 鎖長 | 化学式量 | 分子数 | データベース名(アクセス番号) | 由来する生物種 | エンティティの一般名 |
| 1 | A, E, I (A, E, I) | CH848.10.17.SOSIP gp120 | polymer | 471 | 52835.9 | 3 | UniProt (A0A1W6IPB2) Pfam (PF00516) | HIV-1 06TG.HT008 | |
| 2 | B, F, J (B, F, J) | CH848.10.17.SOSIP gp41 | polymer | 132 | 14733.7 | 3 | Pfam (PF00517) UniProt (by SIFTS) (A0A6H1VLP0) | HIV-1 06TG.HT008 | |
| 3 | C, G, K (C, G, K) | DH270.UCA heavy chain | polymer | 127 | 14110.7 | 3 | Homo sapiens (human) | ||
| 4 | D, H, L (D, H, L) | DH270.UCA light chain | polymer | 111 | 11432.6 | 3 | Homo sapiens (human) | ||
| 5 | M, Q, U (M, Q, U) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 3 | In PDB GlyTouCan (G81315DD) | |||
| 6 | N, R, V (N, R, V) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1559.4 | 3 | In PDB GlyTouCan (G68668TB) | |||
| 7 | O, P, S, T, W... (O, P, S, T, W...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) |
配列変更
A, E, I: 34 - 511 (UniProt: A0A1W6IPB2)
| PDB | 外部データベース | 詳細 |
|---|---|---|
| Ala 31 | - | expression tag |
| Glu 32 | - | expression tag |
| Asn 33 | - | expression tag |
| Asp 133 | Asn 129 | conflict |
| Thr 138 | Asn 134 | conflict |
| Cys 201 | Val 189 | conflict |
| Cys 433 | Ala 417 | conflict |
| Lys 490 | Glu 474 | conflict |
| Glu 492 | Gln 476 | conflict |
| Val 496 | Ile 480 | conflict |
| Arg 500 | Gly 484 | conflict |
| Cys 501 | Ala 485 | conflict |
| Gly 507 | Glu 491 | conflict |
| Arg 509 | Glu 493 | conflict |
| Arg 510 | Lys 494 | conflict |
| Arg 512 | - | expression tag |
| Arg 513 | - | expression tag |
配列ビューア
非対称単位の内容
| タンパク質・ 核酸鎖 | 鎖の数 | 12 |
| 化学式量合計 | 279338.5 | |
| 糖鎖 | 分子数 | 12 |
| 化学式量合計 | 9470.6 | |
| 全て* | 化学式量合計 | 288809.1 |
