2BF1
Structure of an unliganded and fully-glycosylated SIV gp120 envelope glycoprotein
エンティティ
| Entity ID | 鎖名 | 説明 | 種類 | 鎖長 | 化学式量 | 分子数 | データベース名(アクセス番号) | 由来する生物種 | エンティティの一般名 |
| 1 | A | EXTERIOR MEMBRANE GLYCOPROTEIN GP120 | polymer | 316 | 36833.7 | 1 | UniProt (Q07374) Pfam (PF00516) In PDB | SIMIAN IMMUNODEFICIENCY VIRUS (SIV) | SIV GP120 |
| 2 | B, F, H | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 3 | In PDB GlyTouCan (G32152BH) | |||
| 3 | C, K | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 2 | In PDB GlyTouCan (G82348BZ) | |||
| 4 | D, E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G21290RB) | |||
| 5 | G | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 6 | I | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 1 | In PDB GlyTouCan (G46836GH) | |||
| 7 | J | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
| 8 | L | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G22573RC) | |||
| 9 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) |
配列変更
A: 64 - 65 (PDB: 2BF1)
A: 110 - 110 (PDB: 2BF1)
A: 207 - 208 (PDB: 2BF1)
A: 312 - 313 (PDB: 2BF1)
A: 341 - 341 (PDB: 2BF1)
A: 66 - 109 (UniProt: Q07374)
A: 209 - 311 (UniProt: Q07374)
A: 342 - 502 (UniProt: Q07374)
A: 110 - 110 (PDB: 2BF1)
A: 207 - 208 (PDB: 2BF1)
A: 312 - 313 (PDB: 2BF1)
A: 341 - 341 (PDB: 2BF1)
A: 66 - 109 (UniProt: Q07374)
A: 209 - 311 (UniProt: Q07374)
A: 342 - 502 (UniProt: Q07374)
配列ビューア
非対称単位の内容
| タンパク質・ 核酸鎖 | 鎖の数 | 1 |
| 化学式量合計 | 36833.7 | |
| 糖鎖 | 分子数 | 11 |
| 化学式量合計 | 8772.1 | |
| タンパク質・ 核酸・ 糖鎖以外* | 分子数 | 2 |
| 化学式量合計 | 442.4 | |
| 全て* | 化学式量合計 | 46048.2 |
