6V7G
 
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5VG3
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5CAD
 | | Crystal structure of the vicilin from Solanum melongena revealed existence of different anionic ligands in structurally similar pockets | | Descriptor: | ACETATE ION, MAGNESIUM ION, PYROGLUTAMIC ACID, ... | | Authors: | Jain, A, Kumar, A, Salunke, D.M. | | Deposit date: | 2015-06-29 | | Release date: | 2016-04-06 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.49 Å) | | Cite: | Crystal structure of the vicilin from Solanum melongena reveals existence of different anionic ligands in structurally similar pockets
Sci Rep, 6, 2016
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5VF5
 | | Crystal structure of the vicilin from Solanum melongena, re-refinement | | Descriptor: | ACETATE ION, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ... | | Authors: | Porebski, P.J, Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B. | | Deposit date: | 2017-04-06 | | Release date: | 2017-12-06 | | Last modified: | 2023-10-04 | | Method: | X-RAY DIFFRACTION (1.49 Å) | | Cite: | Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
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2ET1
 | | Oxalate oxidase in complex with substrate analogue glycolate | | Descriptor: | GLYOXYLIC ACID, MANGANESE (II) ION, Oxalate oxidase 1 | | Authors: | Rose, R.-S, Opaleye, O, Woo, E.-J, Pickersgill, R.W. | | Deposit date: | 2005-10-27 | | Release date: | 2005-11-22 | | Last modified: | 2023-08-23 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase
J.Biol.Chem., 281, 2006
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1FI2
 | | CRYSTAL STRUCTURE OF GERMIN (OXALATE OXIDASE) | | Descriptor: | MANGANESE (II) ION, OXALATE OXIDASE | | Authors: | Woo, E.J, Dunwell, J.M, Goodenough, P.W, Marvier, A.C, Pickersgill, R.W. | | Deposit date: | 2000-08-03 | | Release date: | 2001-05-01 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities.
Nat.Struct.Biol., 7, 2000
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2ET7
 | | Structural and spectroscopic insights into the mechanism of oxalate oxidase | | Descriptor: | MANGANESE (II) ION, Oxalate oxidase 1 | | Authors: | Opaleye, O, Rose, R.-S, Whittaker, M.M, Woo, E.-J, Whittaker, J.W, Pickersgill, R.W. | | Deposit date: | 2005-10-27 | | Release date: | 2005-11-22 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase
J.Biol.Chem., 281, 2006
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1DGW
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2B8M
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5WXU
 | | 11S globulin from Wrightia tinctoria reveals auxin binding site | | Descriptor: | 11S globulin, 1H-INDOL-3-YLACETIC ACID, CITRATE ANION, ... | | Authors: | Kumar, P, Kesari, P, Dhindwal, S, Kumar, P. | | Deposit date: | 2017-01-09 | | Release date: | 2018-05-23 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | A novel function for globulin in sequestering plant hormone: Crystal structure of Wrightia tinctoria 11S globulin in complex with auxin.
Sci Rep, 7, 2017
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6UFI
 | | W96Y Oxalate Decarboxylase (Bacillus subtilis) | | Descriptor: | CHLORIDE ION, Cupin domain-containing protein, GLYCEROL, ... | | Authors: | Pastore, A.J, Burg, M.J, Twahir, U.T, Bruner, S.D, Angerhofer, A. | | Deposit date: | 2019-09-24 | | Release date: | 2020-09-30 | | Last modified: | 2023-10-11 | | Method: | X-RAY DIFFRACTION (1.72 Å) | | Cite: | Oxalate decarboxylase uses electron hole hopping for catalysis.
J.Biol.Chem., 297, 2021
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6TZP
 | | W96F Oxalate Decarboxylase (B. subtilis) | | Descriptor: | MANGANESE (II) ION, Oxalate decarboxylase | | Authors: | Pastore, A.J, Burg, M.J, Twahir, U.T, Bruner, S.D, Angerhofer, A. | | Deposit date: | 2019-08-12 | | Release date: | 2021-02-17 | | Last modified: | 2023-10-11 | | Method: | X-RAY DIFFRACTION (1.72 Å) | | Cite: | Oxalate decarboxylase uses electron hole hopping for catalysis.
J.Biol.Chem., 297, 2021
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3C3V
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2ETE
 | | Recombinant oxalate oxidase in complex with glycolate | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYOXYLIC ACID, MANGANESE (II) ION, ... | | Authors: | Opaleye, O, Rose, R.-S, Whittaker, M.M, Woo, E.-J, Whittaker, J.W, Pickersgill, R.W. | | Deposit date: | 2005-10-27 | | Release date: | 2005-11-22 | | Last modified: | 2023-08-23 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase
J.Biol.Chem., 281, 2006
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1J58
 | | Crystal Structure of Oxalate Decarboxylase | | Descriptor: | FORMIC ACID, MAGNESIUM ION, MANGANESE (II) ION, ... | | Authors: | Anand, R, Dorrestein, P.C, Kinsland, C, Begley, T.P, Ealick, S.E. | | Deposit date: | 2002-02-25 | | Release date: | 2002-07-03 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Structure of oxalate decarboxylase from Bacillus subtilis at 1.75 A resolution.
Biochemistry, 41, 2002
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2V09
 | | SENS161-164DSSN mutant of Bacillus subtilis Oxalate Decarboxylase OxdC | | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, OXALATE DECARBOXYLASE OXDC | | Authors: | Burrell, M.R, Just, V.J, Bowater, L, Fairhurst, S.A, Requena, L, Lawson, D.M, Bornemann, S. | | Deposit date: | 2007-05-10 | | Release date: | 2007-10-30 | | Last modified: | 2023-12-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Oxalate Decarboxylase and Oxalate Oxidase Activities Can be Interchanged with a Specificity Switch of Up to 282 000 by Mutating an Active Site Lid.
Biochemistry, 46, 2007
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2EA7
 | | Crystal Structure of Adzuki Bean 7S Globulin-1 | | Descriptor: | 7S globulin-1, ACETIC ACID, CALCIUM ION | | Authors: | Fukuda, T, Mikami, B, Utsumi, S. | | Deposit date: | 2007-01-30 | | Release date: | 2008-02-05 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Characterization and crystallography of recombinant 7S globulins of Adzuki bean and structure-function relationships with 7S globulins of various crops.
J.Agric.Food Chem., 56, 2008
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5WPW
 | | Crystal structure of coconut allergen cocosin | | Descriptor: | 11S globulin isoform 1 | | Authors: | Jin, T, Zhang, Y. | | Deposit date: | 2016-11-21 | | Release date: | 2017-10-25 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (1.847 Å) | | Cite: | Crystal Structure of Cocosin, A Potential Food Allergen from Coconut (Cocos nucifera)
J. Agric. Food Chem., 65, 2017
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1L3J
 | | Crystal Structure of Oxalate Decarboxylase Formate Complex | | Descriptor: | FORMIC ACID, MAGNESIUM ION, MANGANESE (II) ION, ... | | Authors: | Anand, R, Dorrestein, P.C, Kinsland, C, Begley, T.P, Ealick, S.E. | | Deposit date: | 2002-02-27 | | Release date: | 2002-07-03 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structure of oxalate decarboxylase from Bacillus subtilis at 1.75 A resolution.
Biochemistry, 41, 2002
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2D5F
 | | Crystal Structure of Recombinant Soybean Proglycinin A3B4 subunit, its Comparison with Mature Glycinin A3B4 subunit, Responsible for Hexamer Assembly | | Descriptor: | CARBONATE ION, MAGNESIUM ION, glycinin A3B4 subunit | | Authors: | Itoh, T, Adachi, M, Masuda, T, Mikami, B, Utsumi, S. | | Deposit date: | 2005-11-01 | | Release date: | 2006-11-14 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
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6V7J
 | | The C2221 crystal form of canavalin at 173 K | | Descriptor: | BENZOIC ACID, CALCIUM ION, Canavalin, ... | | Authors: | McPherson, A. | | Deposit date: | 2019-12-08 | | Release date: | 2020-02-19 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Binding of benzoic acid and anions within the cupin domains of the vicilin protein canavalin from jack bean (Canavalia ensiformis): Crystal structures.
Biochem.Biophys.Res.Commun., 524, 2020
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1UW8
 | | CRYSTAL STRUCTURE OF OXALATE DECARBOXYLASE | | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, OXALATE DECARBOXYLASE OXDC | | Authors: | Just, V.J, Stevenson, C.E.M, Bowater, L, Tanner, A, Lawson, D.M, Bornemann, S. | | Deposit date: | 2004-02-02 | | Release date: | 2004-02-19 | | Last modified: | 2023-12-13 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A Closed Conformation of Bacillus Subtilis Oxalate Decarboxylase Oxdc Provides Evidence for the True Identity of the Active Site
J.Biol.Chem., 279, 2004
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2CAV
 | | CANAVALIN FROM JACK BEAN | | Descriptor: | PROTEIN (CANAVALIN) | | Authors: | Ko, T.-P, Day, J, Macpherson, A. | | Deposit date: | 1998-11-20 | | Release date: | 1998-11-25 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | The refined structure of canavalin from jack bean in two crystal forms at 2.1 and 2.0 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
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2UYA
 | | DEL162-163 mutant of Bacillus subtilis Oxalate Decarboxylase OxdC | | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ... | | Authors: | Just, V.J, Burrell, M.R, Bowater, L, McRobbie, I, Stevenson, C.E.M, Lawson, D.M, Bornemann, S. | | Deposit date: | 2007-04-03 | | Release date: | 2007-08-21 | | Last modified: | 2023-12-13 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | The Identity of the Active Site of Oxalate Decarboxylase and the Importance of the Stability of Active-Site Lid Conformations.
Biochem.J., 407, 2007
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6B4S
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