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3UTV
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BU of 3utv by Molmil
Crystal structure of bacteriorhodopsin mutant Y57F
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Bacteriorhodopsin, RETINAL
Authors:Cao, Z, Bowie, J.U.
Deposit date:2011-11-26
Release date:2012-05-09
Last modified:2014-07-16
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Shifting hydrogen bonds may produce flexible transmembrane helices.
Proc.Natl.Acad.Sci.USA, 109, 2012
1BRX
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BU of 1brx by Molmil
BACTERIORHODOPSIN/LIPID COMPLEX
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Luecke, H, Richter, H.T, Lanyi, J.
Deposit date:1998-05-28
Release date:1999-01-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Proton transfer pathways in bacteriorhodopsin at 2.3 angstrom resolution.
Science, 280, 1998
3VHZ
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BU of 3vhz by Molmil
Crystal structure of the trans isomer of the L93A mutant of bacteriorhodopsin
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
Authors:Kouyama, T, Zhang, J.
Deposit date:2011-09-13
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
4JR8
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BU of 4jr8 by Molmil
Crystal structure of cruxrhodopsin-3 from Haloarcula vallismortis at 2.3 angstrom resolution
Descriptor: BACTERIORUBERIN, Cruxrhodopsin-3, RETINAL
Authors:Kouyama, T, Chan, S.K.
Deposit date:2013-03-21
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Cruxrhodopsin-3 from Haloarcula vallismortis
Plos One, 9, 2014
4KLY
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BU of 4kly by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin mutant D97N from HOT75
Descriptor: Blue-light absorbing proteorhodopsin, RETINAL
Authors:Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
Deposit date:2013-05-07
Release date:2013-06-05
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013
4KNF
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BU of 4knf by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin double-mutant D97N/Q105L from HOT75
Descriptor: Blue-light absorbing proteorhodopsin, RETINAL
Authors:Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
Deposit date:2013-05-09
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013
4L35
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BU of 4l35 by Molmil
Crystal structure of cruxrhodopsin-3 at pH5 from Haloarcula vallismortis at 2.1 angstrom resolution
Descriptor: BACTERIORUBERIN, Cruxrhodopsin-3, RETINAL
Authors:Kouyama, T, Chan, S.K.
Deposit date:2013-06-05
Release date:2014-06-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Cruxrhodopsin-3 from Haloarcula vallismortis
Plos One, 9, 2014
3VI0
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BU of 3vi0 by Molmil
Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
Authors:Kouyama, T, Zhang, J.
Deposit date:2011-09-13
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
3VVK
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BU of 3vvk by Molmil
An M-like Reaction State of the azide-bound purple form of pharaonis halorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, AZIDE ION, BACTERIORUBERIN, ...
Authors:Kouyama, T, Nakanishi, T.
Deposit date:2012-07-26
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Large deformation of helix F during the photoreaction cycle of Pharaonis halorhodopsin in complex with azide
Biophys.J., 104, 2013
1IW9
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BU of 1iw9 by Molmil
Crystal Structure of the M Intermediate of Bacteriorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, RETINAL, ...
Authors:Takeda, K, Matsui, Y, Kamiya, N, Adachi, S, Okumura, H, Kouyama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-04-25
Release date:2003-12-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the M intermediate of bacteriorhodopsin: allosteric structural changes mediated by sliding movement of a transmembrane helix
J.Mol.Biol., 341, 2004
1IW6
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BU of 1iw6 by Molmil
Crystal Structure of the Ground State of Bacteriorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, RETINAL, ...
Authors:Kouyama, T, Okumura, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-04-22
Release date:2002-12-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Specific Damage Induced by X-ray Radiation and Structural Changes in the Primary Photoreaction of Bacteriorhodopsin.
J.Mol.Biol., 324, 2002
1IXF
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BU of 1ixf by Molmil
Crystal Structure of the K intermediate of bacteriorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, RETINAL, ...
Authors:Matsui, Y, Sakai, K, Murakami, M, Shiro, Y, Adachi, S, Okumura, H, Kouyama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-06-20
Release date:2002-12-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Specific Damage Induced by X-ray Radiation and Structural Changes in the Primary Photoreaction of Bacteriorhodopsin
J.MOL.BIOL., 324, 2002
1E0P
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BU of 1e0p by Molmil
L intermediate of bacteriorhodopsin
Descriptor: BACTERIORHODOPSIN, GROUND STATE, RETINAL
Authors:Royant, A, Edman, K, Ursby, T, Pebay-Peyroula, E, Landau, E.M, Neutze, R.
Deposit date:2000-04-04
Release date:2000-08-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Helix Deformation is Coupled to Vectorial Proton Transport in Bacteriorhodopsin'S Photocycle
Nature, 406, 2000
1E12
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BU of 1e12 by Molmil
Halorhodopsin, a light-driven chloride pump
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, HALORHODOPSIN, ...
Authors:Essen, L.-O, Kolbe, M, Oesterhelt, D.
Deposit date:2000-04-14
Release date:2000-06-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Light-Driven Chloride Pump Halorhodopsin at 1.8 A Resolution
Science, 288, 2000
1CWQ
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BU of 1cwq by Molmil
M INTERMEDIATE STRUCTURE OF THE WILD TYPE BACTERIORHODOPSIN IN COMBINATION WITH THE GROUND STATE STRUCTURE
Descriptor: BACTERIORHODOPSIN ("M" STATE INTERMEDIATE IN COMBINATION WITH GROUND STATE), HEXANE, N-OCTANE, ...
Authors:Sass, H.J, Berendzen, J, Neff, D, Gessenich, R, Ormos, P, Bueldt, G.
Deposit date:1999-08-26
Release date:1999-10-20
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural alterations for proton translocation in the M state of wild-type bacteriorhodopsin.
Nature, 406, 2000
1DZE
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BU of 1dze by Molmil
Structure of the M Intermediate of Bacteriorhodopsin trapped at 100K
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ...
Authors:Takeda, K, Matsui, Y, Sato, H, Hino, T, Kanamori, E, Okumura, H, Yamane, T, Iizuka, T, Kamiya, N, Adachi, S, Kouyama, T.
Deposit date:2000-02-25
Release date:2000-08-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the M Intermediate of Bacteriorhodopsin: Allosteric Structural Changes Mediated by Sliding Movement of a Transmembrane Helix
J.Mol.Biol., 341, 2004
1FBK
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BU of 1fbk by Molmil
CRYSTAL STRUCTURE OF CYTOPLASMICALLY OPEN CONFORMATION OF BACTERIORHODOPSIN
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Subramaniam, S, Henderson, R.
Deposit date:2000-07-15
Release date:2000-08-09
Last modified:2021-11-03
Method:ELECTRON CRYSTALLOGRAPHY (3.2 Å)
Cite:Molecular mechanism of vectorial proton translocation by bacteriorhodopsin.
Nature, 406, 2000
1KGB
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BU of 1kgb by Molmil
structure of ground-state bacteriorhodopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, RETINAL, bacteriorhodopsin
Authors:Facciotti, M.T, Rouhani, S, Burkard, F.T, Betancourt, F.M, Downing, K.H, Rose, R.B, McDermott, G, Glaeser, R.M.
Deposit date:2001-11-26
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.
Biophys.J., 81, 2001
1JV6
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BU of 1jv6 by Molmil
BACTERIORHODOPSIN D85S/F219L DOUBLE MUTANT AT 2.00 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Rouhani, S, Cartailler, J.-P, Facciotti, M.T, Walian, P, Needleman, R, Lanyi, J.K, Glaeser, R.M, Luecke, H.
Deposit date:2001-08-28
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate.
J.Mol.Biol., 313, 2001
1FBB
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BU of 1fbb by Molmil
CRYSTAL STRUCTURE OF NATIVE CONFORMATION OF BACTERIORHODOPSIN
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Subramaniam, S, Henderson, R.
Deposit date:2000-07-15
Release date:2000-08-09
Last modified:2018-02-28
Method:ELECTRON CRYSTALLOGRAPHY (3.2 Å)
Cite:Molecular mechanism of vectorial proton translocation by bacteriorhodopsin.
Nature, 406, 2000
1JV7
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BU of 1jv7 by Molmil
BACTERIORHODOPSIN O-LIKE INTERMEDIATE STATE OF THE D85S MUTANT AT 2.25 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Rouhani, S, Cartailler, J.-P, Facciotti, M.T, Walian, P, Needleman, R, Lanyi, J.K, Glaeser, R.M, Luecke, H.
Deposit date:2001-08-28
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate.
J.Mol.Biol., 313, 2001
1KG9
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BU of 1kg9 by Molmil
Structure of a "mock-trapped" early-M intermediate of bacteriorhosopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, RETINAL, bacteriorhodopsin
Authors:Facciotti, M.T, Rouhani, S, Burkard, F.T, Betancourt, F.M, Downing, K.H, Rose, R.B, McDermott, G, Glaeser, R.M.
Deposit date:2001-11-26
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.
Biophys.J., 81, 2001
1BRD
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BU of 1brd by Molmil
Model for the structure of Bacteriorhodopsin based on high-resolution Electron Cryo-microscopy
Descriptor: BACTERIORHODOPSIN PRECURSOR, RETINAL
Authors:Henderson, R, Baldwin, J.M, Ceska, T.A, Zemlin, F, Beckmann, E, Downing, K.H.
Deposit date:1990-05-23
Release date:1991-04-15
Last modified:2024-04-17
Method:ELECTRON CRYSTALLOGRAPHY (3.5 Å)
Cite:Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.
J.Mol.Biol., 213, 1990
1JGJ
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BU of 1jgj by Molmil
CRYSTAL STRUCTURE OF SENSORY RHODOPSIN II AT 2.4 ANGSTROMS: INSIGHTS INTO COLOR TUNING AND TRANSDUCER INTERACTION
Descriptor: RETINAL, SENSORY RHODOPSIN II, octyl beta-D-glucopyranoside
Authors:Luecke, H.
Deposit date:2001-06-25
Release date:2001-07-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of sensory rhodopsin II at 2.4 angstroms: insights into color tuning and transducer interaction.
Science, 293, 2001
1L0M
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BU of 1l0m by Molmil
Solution structure of Bacteriorhodopsin
Descriptor: Bacteriorhodopsin
Authors:Katragadda, M, Alderfer, J.L, Yeagle, P.L.
Deposit date:2002-02-11
Release date:2002-03-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Assembly of a polytopic membrane protein structure from the solution structures of overlapping peptide fragments of bacteriorhodopsin.
Biophys.J., 81, 2001

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