6OGZ

In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0001172	biological_process	RNA-templated transcription
A	0003723	molecular_function	RNA binding
A	0003968	molecular_function	RNA-dependent RNA polymerase activity
A	0006351	biological_process	DNA-templated transcription
A	0016740	molecular_function	transferase activity
A	0016779	molecular_function	nucleotidyltransferase activity
A	0019079	biological_process	viral genome replication
A	0044423	cellular_component	virion component
E	0003723	molecular_function	RNA binding
E	0019013	cellular_component	viral nucleocapsid
E	0019028	cellular_component	viral capsid
E	0039616	cellular_component	T=2 icosahedral viral capsid
E	0039625	cellular_component	viral inner capsid
E	0044423	cellular_component	virion component
F	0003723	molecular_function	RNA binding
F	0019013	cellular_component	viral nucleocapsid
F	0019028	cellular_component	viral capsid
F	0039616	cellular_component	T=2 icosahedral viral capsid
F	0039625	cellular_component	viral inner capsid
F	0044423	cellular_component	virion component
G	0003723	molecular_function	RNA binding
G	0019013	cellular_component	viral nucleocapsid
G	0019028	cellular_component	viral capsid
G	0039616	cellular_component	T=2 icosahedral viral capsid
G	0039625	cellular_component	viral inner capsid
G	0044423	cellular_component	virion component
H	0003723	molecular_function	RNA binding
H	0019013	cellular_component	viral nucleocapsid
H	0019028	cellular_component	viral capsid
H	0039616	cellular_component	T=2 icosahedral viral capsid
H	0039625	cellular_component	viral inner capsid
H	0044423	cellular_component	virion component
I	0003723	molecular_function	RNA binding
I	0019013	cellular_component	viral nucleocapsid
I	0019028	cellular_component	viral capsid
I	0039616	cellular_component	T=2 icosahedral viral capsid
I	0039625	cellular_component	viral inner capsid
I	0044423	cellular_component	virion component
J	0003723	molecular_function	RNA binding
J	0019013	cellular_component	viral nucleocapsid
J	0019028	cellular_component	viral capsid
J	0039616	cellular_component	T=2 icosahedral viral capsid
J	0039625	cellular_component	viral inner capsid
J	0044423	cellular_component	virion component
K	0003723	molecular_function	RNA binding
K	0019013	cellular_component	viral nucleocapsid
K	0019028	cellular_component	viral capsid
K	0039616	cellular_component	T=2 icosahedral viral capsid
K	0039625	cellular_component	viral inner capsid
K	0044423	cellular_component	virion component
L	0003723	molecular_function	RNA binding
L	0019013	cellular_component	viral nucleocapsid
L	0019028	cellular_component	viral capsid
L	0039616	cellular_component	T=2 icosahedral viral capsid
L	0039625	cellular_component	viral inner capsid
L	0044423	cellular_component	virion component
M	0003723	molecular_function	RNA binding
M	0019013	cellular_component	viral nucleocapsid
M	0019028	cellular_component	viral capsid
M	0039616	cellular_component	T=2 icosahedral viral capsid
M	0039625	cellular_component	viral inner capsid
M	0044423	cellular_component	virion component
N	0003723	molecular_function	RNA binding
N	0019013	cellular_component	viral nucleocapsid
N	0019028	cellular_component	viral capsid
N	0039616	cellular_component	T=2 icosahedral viral capsid
N	0039625	cellular_component	viral inner capsid
N	0044423	cellular_component	virion component

Functional Information from PDB Data

site_id	AC1
Number of Residues	16
Details	binding site for residue UTP A 1101

Chain	Residue
A	ARG452
A	SER591
A	THR596
A	ASN600
A	ASP631
A	ASP632
B	A599
C	A593
A	ARG457
A	ARG460
A	ASP520
A	VAL521
A	SER522
A	GLN523
A	TRP524
A	ASP525

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site_id	AC2
Number of Residues	7
Details	binding site for residue GTP A 1102

Chain	Residue
A	TYR11
A	ASN83
A	ASN143
A	ARG184
A	HIS185
A	TYR189
A	ARG749

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