6OD8
Crystal structure of a putative aspartyl-tRNA synthetase from Leishmania major Friedlin
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003723 | molecular_function | RNA binding |
A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
A | 0004815 | molecular_function | aspartate-tRNA ligase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006418 | biological_process | tRNA aminoacylation for protein translation |
A | 0006422 | biological_process | aspartyl-tRNA aminoacylation |
A | 0016874 | molecular_function | ligase activity |
A | 0017101 | cellular_component | aminoacyl-tRNA synthetase multienzyme complex |
B | 0000166 | molecular_function | nucleotide binding |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0003723 | molecular_function | RNA binding |
B | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
B | 0004815 | molecular_function | aspartate-tRNA ligase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006418 | biological_process | tRNA aminoacylation for protein translation |
B | 0006422 | biological_process | aspartyl-tRNA aminoacylation |
B | 0016874 | molecular_function | ligase activity |
B | 0017101 | cellular_component | aminoacyl-tRNA synthetase multienzyme complex |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 2 |
詳細 | binding site for residue EDO A 601 |
鎖名 | 残基 |
A | GLU454 |
A | ARG490 |
site_id | AC2 |
残基数 | 7 |
詳細 | binding site for residue EDO A 602 |
鎖名 | 残基 |
A | SER266 |
A | GLY305 |
A | ASP307 |
A | GLY519 |
A | ILE520 |
A | HOH712 |
A | HOH948 |
site_id | AC3 |
残基数 | 6 |
詳細 | binding site for residue EDO A 603 |
鎖名 | 残基 |
A | GLN381 |
A | ARG383 |
A | ARG393 |
A | ASN395 |
A | ASP441 |
A | HOH804 |
site_id | AC4 |
残基数 | 3 |
詳細 | binding site for residue EDO A 604 |
鎖名 | 残基 |
A | MET453 |
A | GLU454 |
A | HOH901 |
site_id | AC5 |
残基数 | 8 |
詳細 | binding site for residue EDO A 605 |
鎖名 | 残基 |
A | SER266 |
A | PRO267 |
A | GLN268 |
A | LEU269 |
A | TYR270 |
A | HOH763 |
A | HOH805 |
A | HOH970 |
site_id | AC6 |
残基数 | 8 |
詳細 | binding site for residue EDO A 606 |
鎖名 | 残基 |
A | ASP321 |
A | GLU324 |
A | SER325 |
A | HIS385 |
A | ASN386 |
A | SER389 |
A | HOH852 |
A | HOH973 |
site_id | AC7 |
残基数 | 3 |
詳細 | binding site for residue EDO A 607 |
鎖名 | 残基 |
A | GLU332 |
A | ARG333 |
A | THR336 |
site_id | AC8 |
残基数 | 5 |
詳細 | binding site for residue EDO A 608 |
鎖名 | 残基 |
A | THR405 |
A | LEU407 |
A | ASP408 |
A | LYS410 |
B | ASP457 |
site_id | AC9 |
残基数 | 7 |
詳細 | binding site for residue EDO A 609 |
鎖名 | 残基 |
A | GLY426 |
A | LYS430 |
A | ASP436 |
A | ARG470 |
A | HOH754 |
A | HOH837 |
A | HOH874 |
site_id | AD1 |
残基数 | 4 |
詳細 | binding site for residue FMT A 610 |
鎖名 | 残基 |
A | ILE501 |
A | GLU503 |
A | TYR504 |
B | PRO550 |
site_id | AD2 |
残基数 | 4 |
詳細 | binding site for residue EDO B 601 |
鎖名 | 残基 |
B | GLU454 |
B | ARG490 |
B | HOH956 |
B | HOH996 |
site_id | AD3 |
残基数 | 5 |
詳細 | binding site for residue EDO B 602 |
鎖名 | 残基 |
B | ARG290 |
B | GLY305 |
B | ASP307 |
B | GLY519 |
B | HOH717 |
site_id | AD4 |
残基数 | 8 |
詳細 | binding site for residue EDO B 603 |
鎖名 | 残基 |
B | GLN381 |
B | ARG383 |
B | ARG393 |
B | ILE394 |
B | ASN395 |
B | ASP441 |
B | HOH708 |
B | HOH780 |
site_id | AD5 |
残基数 | 6 |
詳細 | binding site for residue EDO B 604 |
鎖名 | 残基 |
B | MET453 |
B | GLU454 |
B | ILE481 |
B | HOH850 |
B | HOH917 |
B | HOH956 |
site_id | AD6 |
残基数 | 6 |
詳細 | binding site for residue EDO B 605 |
鎖名 | 残基 |
B | ASP321 |
B | GLU324 |
B | SER325 |
B | ASN386 |
B | SER389 |
B | HOH971 |
site_id | AD7 |
残基数 | 3 |
詳細 | binding site for residue EDO B 606 |
鎖名 | 残基 |
B | GLU332 |
B | ARG333 |
B | THR336 |
site_id | AD8 |
残基数 | 7 |
詳細 | binding site for residue EDO B 607 |
鎖名 | 残基 |
A | ASP457 |
B | THR405 |
B | VAL406 |
B | LEU407 |
B | ASP408 |
B | LYS410 |
B | HOH969 |
site_id | AD9 |
残基数 | 6 |
詳細 | binding site for residue EDO B 608 |
鎖名 | 残基 |
B | GLY426 |
B | ASP436 |
B | ARG470 |
B | HOH768 |
B | HOH922 |
B | HOH1000 |
site_id | AE1 |
残基数 | 5 |
詳細 | binding site for residue FMT B 609 |
鎖名 | 残基 |
B | ILE501 |
B | GLU503 |
B | TYR504 |
B | HOH972 |
A | PRO550 |