Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6G59

Structure of the alanine racemase from Staphylococcus aureus in complex with an pyridoxal-6- phosphate derivative

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
A0003824molecular_functioncatalytic activity
A0005829cellular_componentcytosol
A0006522biological_processalanine metabolic process
A0008784molecular_functionalanine racemase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016853molecular_functionisomerase activity
A0030170molecular_functionpyridoxal phosphate binding
A0030632biological_processD-alanine biosynthetic process
B0003824molecular_functioncatalytic activity
B0005829cellular_componentcytosol
B0006522biological_processalanine metabolic process
B0008784molecular_functionalanine racemase activity
B0009252biological_processpeptidoglycan biosynthetic process
B0016853molecular_functionisomerase activity
B0030170molecular_functionpyridoxal phosphate binding
B0030632biological_processD-alanine biosynthetic process
PDBデータベースに由来する情報
site_idAC1
残基数10
詳細binding site for residue EM2 A 401
鎖名残基
ALYS39
AHOH525
ATYR43
AHIS168
AASN203
ASER204
AARG219
AGLY221
AILE222
ATYR354

site_idAC2
残基数9
詳細binding site for residue SO4 A 402
鎖名残基
AALA-1
AGLY0
APHE1
ASER2
ALYS4
AASP143
ATHR144
AARG185
AHOH552

site_idAC3
残基数3
詳細binding site for residue SO4 A 403
鎖名残基
ALYS49
AARG52
AHIS76

site_idAC4
残基数4
詳細binding site for residue SO4 A 404
鎖名残基
AHIS240
APRO243
AHIS335
AARG336

site_idAC5
残基数4
詳細binding site for residue SO4 A 405
鎖名残基
AARG290
AILE291
AGLN293
AARG309

site_idAC6
残基数3
詳細binding site for residue NA A 406
鎖名残基
AILE154
ATYR157
ALEU160

site_idAC7
残基数6
詳細binding site for residue NA A 407
鎖名残基
ATYR227
AVAL245
AASP333
AASN334
AVAL342
AHOH574

site_idAC8
残基数5
詳細binding site for residue NA A 408
鎖名残基
ASER262
ASER264
BGLY135
BMET136
BALA170

site_idAC9
残基数3
詳細binding site for residue CL A 409
鎖名残基
AHIS29
APRO30
AASN31

site_idAD1
残基数5
詳細binding site for residue SO4 B 402
鎖名残基
BHIS240
BPRO243
BHIS335
BARG336
BHOH542

site_idAD2
残基数4
詳細binding site for residue SO4 B 403
鎖名残基
BTYR5
BTYR10
BILE367
BARG374

site_idAD3
残基数4
詳細binding site for residue NA B 404
鎖名残基
BILE154
BTYR157
BLEU160
BHOH547

site_idAD4
残基数3
詳細binding site for residue CL B 405
鎖名残基
BHIS29
BASN31
BLYS32

site_idAD5
残基数18
詳細binding site for Di-peptide EM2 B 401 and LYS B 39
鎖名残基
AASP313
BVAL37
BVAL38
BALA40
BASN41
BALA42
BTYR43
BALA63
BALA65
BGLU69
BHIS168
BASN203
BSER204
BARG219
BGLY221
BILE222
BTYR354
BHOH536

UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_idPS00395
残基数11
詳細ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKANAYGLG
鎖名残基詳細
AALA36-GLY46

SwissProt/UniProtに記載されている蛋白質分子機能情報
site_idSWS_FT_FI1
残基数2
詳細ACT_SITE: Proton acceptor; specific for D-alanine => ECO:0000305|PubMed:22194336
鎖名残基詳細
ALYS39
BLYS39

site_idSWS_FT_FI2
残基数2
詳細ACT_SITE: Proton acceptor; specific for L-alanine => ECO:0000305|PubMed:22194336
鎖名残基詳細
ATYR265
BTYR265

site_idSWS_FT_FI3
残基数2
詳細BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01201
鎖名残基詳細
AARG138
BARG138

site_idSWS_FT_FI4
残基数2
詳細BINDING: BINDING => ECO:0000305
鎖名残基詳細
AMET312
BMET312

site_idSWS_FT_FI5
残基数2
詳細MOD_RES: N6-(pyridoxal phosphate)lysine
鎖名残基詳細
ALYS39
BLYS39

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon