5WTL
Crystal structure of the periplasmic portion of outer membrane protein A (OmpA) from Capnocytophaga gingivalis
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0005509 | molecular_function | calcium ion binding |
A | 0007155 | biological_process | cell adhesion |
A | 0016020 | cellular_component | membrane |
B | 0005509 | molecular_function | calcium ion binding |
B | 0007155 | biological_process | cell adhesion |
B | 0016020 | cellular_component | membrane |
C | 0005509 | molecular_function | calcium ion binding |
C | 0007155 | biological_process | cell adhesion |
C | 0016020 | cellular_component | membrane |
D | 0005509 | molecular_function | calcium ion binding |
D | 0007155 | biological_process | cell adhesion |
D | 0016020 | cellular_component | membrane |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 6 |
詳細 | binding site for residue CA A 1001 |
鎖名 | 残基 |
A | ASP198 |
A | ASP200 |
A | ASP202 |
A | ILE204 |
A | ASP209 |
A | HOH1160 |
site_id | AC2 |
残基数 | 6 |
詳細 | binding site for residue CA A 1002 |
鎖名 | 残基 |
A | CYS211 |
A | VAL214 |
A | GLY222 |
A | ASP200 |
A | ASP202 |
A | ASP209 |
site_id | AC3 |
残基数 | 6 |
詳細 | binding site for residue CA A 1003 |
鎖名 | 残基 |
A | ASP225 |
A | ASP227 |
A | ASP229 |
A | ILE231 |
A | ASP236 |
A | HOH1105 |
site_id | AC4 |
残基数 | 6 |
詳細 | binding site for residue CA A 1004 |
鎖名 | 残基 |
A | ASP227 |
A | ASP229 |
A | ASP236 |
A | CYS238 |
A | VAL241 |
A | GLY249 |
site_id | AC5 |
残基数 | 6 |
詳細 | binding site for residue CA A 1005 |
鎖名 | 残基 |
A | ASP252 |
A | ASP254 |
A | ASP256 |
A | ILE258 |
A | ASP263 |
A | HOH1113 |
site_id | AC6 |
残基数 | 6 |
詳細 | binding site for residue CA A 1006 |
鎖名 | 残基 |
A | ASP254 |
A | ASP256 |
A | ASP263 |
A | CYS265 |
A | VAL268 |
A | GLY276 |
site_id | AC7 |
残基数 | 6 |
詳細 | binding site for residue CA A 1007 |
鎖名 | 残基 |
A | ASP279 |
A | ASP281 |
A | ASP283 |
A | ILE285 |
A | ASP290 |
A | HOH1147 |
site_id | AC8 |
残基数 | 6 |
詳細 | binding site for residue CA A 1008 |
鎖名 | 残基 |
A | ASP281 |
A | ASP283 |
A | ASP290 |
A | CYS292 |
A | VAL295 |
A | GLY303 |
site_id | AC9 |
残基数 | 6 |
詳細 | binding site for residue CA A 1009 |
鎖名 | 残基 |
A | ASP308 |
A | ASP310 |
A | ASP312 |
A | VAL314 |
A | ASP319 |
A | HOH1108 |
site_id | AD1 |
残基数 | 6 |
詳細 | binding site for residue CA A 1010 |
鎖名 | 残基 |
A | ASP310 |
A | ASP312 |
A | ASP319 |
A | CYS321 |
A | VAL324 |
A | GLY332 |
site_id | AD2 |
残基数 | 6 |
詳細 | binding site for residue CA A 1011 |
鎖名 | 残基 |
A | GLU424 |
A | GLN426 |
A | HOH1204 |
B | GLU424 |
B | GLN426 |
B | HOH1186 |
site_id | AD3 |
残基数 | 6 |
詳細 | binding site for residue CA B 1001 |
鎖名 | 残基 |
B | ASP198 |
B | ASP200 |
B | ASP202 |
B | ILE204 |
B | ASP209 |
B | HOH1102 |
site_id | AD4 |
残基数 | 6 |
詳細 | binding site for residue CA B 1002 |
鎖名 | 残基 |
B | ASP200 |
B | ASP202 |
B | ASP209 |
B | CYS211 |
B | VAL214 |
B | GLY222 |
site_id | AD5 |
残基数 | 6 |
詳細 | binding site for residue CA B 1003 |
鎖名 | 残基 |
B | ASP225 |
B | ASP227 |
B | ASP229 |
B | ILE231 |
B | ASP236 |
B | HOH1101 |
site_id | AD6 |
残基数 | 6 |
詳細 | binding site for residue CA B 1004 |
鎖名 | 残基 |
B | ASP227 |
B | ASP229 |
B | ASP236 |
B | CYS238 |
B | VAL241 |
B | GLY249 |
site_id | AD7 |
残基数 | 6 |
詳細 | binding site for residue CA B 1005 |
鎖名 | 残基 |
B | ASP252 |
B | ASP254 |
B | ASP256 |
B | ILE258 |
B | ASP263 |
B | HOH1115 |
site_id | AD8 |
残基数 | 6 |
詳細 | binding site for residue CA B 1006 |
鎖名 | 残基 |
B | CYS265 |
B | VAL268 |
B | GLY276 |
B | ASP254 |
B | ASP256 |
B | ASP263 |
site_id | AD9 |
残基数 | 6 |
詳細 | binding site for residue CA B 1007 |
鎖名 | 残基 |
B | ASP279 |
B | ASP281 |
B | ASP283 |
B | ILE285 |
B | ASP290 |
B | HOH1123 |
site_id | AE1 |
残基数 | 6 |
詳細 | binding site for residue CA B 1008 |
鎖名 | 残基 |
B | ASP281 |
B | ASP283 |
B | ASP290 |
B | CYS292 |
B | VAL295 |
B | GLY303 |
site_id | AE2 |
残基数 | 6 |
詳細 | binding site for residue CA B 1009 |
鎖名 | 残基 |
B | ASP308 |
B | ASP310 |
B | ASP312 |
B | VAL314 |
B | ASP319 |
B | HOH1131 |
site_id | AE3 |
残基数 | 6 |
詳細 | binding site for residue CA B 1010 |
鎖名 | 残基 |
B | ASP310 |
B | ASP312 |
B | ASP319 |
B | CYS321 |
B | VAL324 |
B | GLY332 |
site_id | AE4 |
残基数 | 4 |
詳細 | binding site for residue SO4 B 1011 |
鎖名 | 残基 |
B | THR355 |
B | GLY356 |
B | ARG405 |
B | ARG447 |
site_id | AE5 |
残基数 | 6 |
詳細 | binding site for residue CA C 1001 |
鎖名 | 残基 |
C | ASP198 |
C | ASP200 |
C | ASP202 |
C | ILE204 |
C | ASP209 |
C | HOH1104 |
site_id | AE6 |
残基数 | 6 |
詳細 | binding site for residue CA C 1002 |
鎖名 | 残基 |
C | ASP200 |
C | ASP202 |
C | ASP209 |
C | CYS211 |
C | VAL214 |
C | GLY222 |
site_id | AE7 |
残基数 | 6 |
詳細 | binding site for residue CA C 1003 |
鎖名 | 残基 |
C | ASP225 |
C | ASP227 |
C | ASP229 |
C | ILE231 |
C | ASP236 |
C | HOH1101 |
site_id | AE8 |
残基数 | 6 |
詳細 | binding site for residue CA C 1004 |
鎖名 | 残基 |
C | ASP227 |
C | ASP229 |
C | ASP236 |
C | CYS238 |
C | VAL241 |
C | GLY249 |
site_id | AE9 |
残基数 | 6 |
詳細 | binding site for residue CA C 1005 |
鎖名 | 残基 |
C | ASP252 |
C | ASP254 |
C | ASP256 |
C | ILE258 |
C | ASP263 |
C | HOH1111 |
site_id | AF1 |
残基数 | 6 |
詳細 | binding site for residue CA C 1006 |
鎖名 | 残基 |
C | ASP254 |
C | ASP256 |
C | ASP263 |
C | CYS265 |
C | VAL268 |
C | GLY276 |
site_id | AF2 |
残基数 | 6 |
詳細 | binding site for residue CA C 1007 |
鎖名 | 残基 |
C | ASP279 |
C | ASP281 |
C | ASP283 |
C | ILE285 |
C | ASP290 |
C | HOH1135 |
site_id | AF3 |
残基数 | 6 |
詳細 | binding site for residue CA C 1008 |
鎖名 | 残基 |
C | ASP281 |
C | ASP283 |
C | ASP290 |
C | CYS292 |
C | VAL295 |
C | GLY303 |
site_id | AF4 |
残基数 | 6 |
詳細 | binding site for residue CA C 1009 |
鎖名 | 残基 |
C | ASP308 |
C | ASP310 |
C | ASP312 |
C | VAL314 |
C | ASP319 |
C | HOH1155 |
site_id | AF5 |
残基数 | 6 |
詳細 | binding site for residue CA C 1010 |
鎖名 | 残基 |
C | ASP310 |
C | ASP312 |
C | ASP319 |
C | CYS321 |
C | VAL324 |
C | GLY332 |
site_id | AF6 |
残基数 | 4 |
詳細 | binding site for residue MES C 1011 |
鎖名 | 残基 |
C | LYS438 |
C | ASN439 |
C | LYS440 |
C | ARG443 |
site_id | AF7 |
残基数 | 6 |
詳細 | binding site for residue SO4 C 1012 |
鎖名 | 残基 |
C | THR355 |
C | GLY356 |
C | ARG405 |
C | ARG447 |
C | HOH1106 |
C | HOH1166 |
site_id | AF8 |
残基数 | 6 |
詳細 | binding site for residue CA C 1013 |
鎖名 | 残基 |
C | GLU424 |
C | GLN426 |
C | HOH1202 |
D | GLU424 |
D | GLN426 |
D | HOH669 |
site_id | AF9 |
残基数 | 5 |
詳細 | binding site for residue CA D 501 |
鎖名 | 残基 |
D | ASP209 |
D | CYS211 |
D | VAL214 |
D | GLY216 |
D | GLY222 |
site_id | AG1 |
残基数 | 6 |
詳細 | binding site for residue CA D 502 |
鎖名 | 残基 |
D | ASP225 |
D | ASP227 |
D | ASP229 |
D | ILE231 |
D | ASP236 |
D | HOH605 |
site_id | AG2 |
残基数 | 6 |
詳細 | binding site for residue CA D 503 |
鎖名 | 残基 |
D | ASP227 |
D | ASP229 |
D | ASP236 |
D | CYS238 |
D | VAL241 |
D | GLY249 |
site_id | AG3 |
残基数 | 6 |
詳細 | binding site for residue CA D 504 |
鎖名 | 残基 |
D | ASP252 |
D | ASP254 |
D | ASP256 |
D | ILE258 |
D | ASP263 |
D | HOH604 |
site_id | AG4 |
残基数 | 6 |
詳細 | binding site for residue CA D 505 |
鎖名 | 残基 |
D | ASP254 |
D | ASP256 |
D | ASP263 |
D | CYS265 |
D | VAL268 |
D | GLY276 |
site_id | AG5 |
残基数 | 5 |
詳細 | binding site for residue CA D 506 |
鎖名 | 残基 |
D | ASP279 |
D | ASP281 |
D | ASP283 |
D | ILE285 |
D | ASP290 |
site_id | AG6 |
残基数 | 6 |
詳細 | binding site for residue CA D 507 |
鎖名 | 残基 |
D | ASP281 |
D | ASP283 |
D | ASP290 |
D | CYS292 |
D | VAL295 |
D | GLY303 |
site_id | AG7 |
残基数 | 6 |
詳細 | binding site for residue CA D 508 |
鎖名 | 残基 |
D | ASP308 |
D | ASP310 |
D | ASP312 |
D | VAL314 |
D | ASP319 |
D | HOH606 |
site_id | AG8 |
残基数 | 6 |
詳細 | binding site for residue CA D 509 |
鎖名 | 残基 |
D | ASP310 |
D | ASP312 |
D | ASP319 |
D | CYS321 |
D | VAL324 |
D | GLY332 |