5O5O
X-ray crystal structure of RapZ from Escherichia coli (P32 space group)
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0003723 | molecular_function | RNA binding |
A | 0005515 | molecular_function | protein binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005525 | molecular_function | GTP binding |
A | 0032991 | cellular_component | protein-containing complex |
A | 0042802 | molecular_function | identical protein binding |
A | 0050779 | biological_process | RNA destabilization |
A | 0051289 | biological_process | protein homotetramerization |
A | 0060090 | molecular_function | molecular adaptor activity |
A | 0097367 | molecular_function | carbohydrate derivative binding |
B | 0003723 | molecular_function | RNA binding |
B | 0005515 | molecular_function | protein binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005525 | molecular_function | GTP binding |
B | 0032991 | cellular_component | protein-containing complex |
B | 0042802 | molecular_function | identical protein binding |
B | 0050779 | biological_process | RNA destabilization |
B | 0051289 | biological_process | protein homotetramerization |
B | 0060090 | molecular_function | molecular adaptor activity |
B | 0097367 | molecular_function | carbohydrate derivative binding |
C | 0003723 | molecular_function | RNA binding |
C | 0005515 | molecular_function | protein binding |
C | 0005524 | molecular_function | ATP binding |
C | 0005525 | molecular_function | GTP binding |
C | 0032991 | cellular_component | protein-containing complex |
C | 0042802 | molecular_function | identical protein binding |
C | 0050779 | biological_process | RNA destabilization |
C | 0051289 | biological_process | protein homotetramerization |
C | 0060090 | molecular_function | molecular adaptor activity |
C | 0097367 | molecular_function | carbohydrate derivative binding |
D | 0003723 | molecular_function | RNA binding |
D | 0005515 | molecular_function | protein binding |
D | 0005524 | molecular_function | ATP binding |
D | 0005525 | molecular_function | GTP binding |
D | 0032991 | cellular_component | protein-containing complex |
D | 0042802 | molecular_function | identical protein binding |
D | 0050779 | biological_process | RNA destabilization |
D | 0051289 | biological_process | protein homotetramerization |
D | 0060090 | molecular_function | molecular adaptor activity |
D | 0097367 | molecular_function | carbohydrate derivative binding |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 6 |
詳細 | binding site for residue SO4 A 301 |
鎖名 | 残基 |
A | ASN188 |
A | HIS190 |
A | CYS247 |
A | THR248 |
A | GLY249 |
A | ARG253 |
site_id | AC2 |
残基数 | 6 |
詳細 | binding site for residue SO4 A 302 |
鎖名 | 残基 |
A | GLY13 |
A | LYS14 |
A | SER15 |
A | SER10 |
A | GLY11 |
A | SER12 |
site_id | AC3 |
残基数 | 6 |
詳細 | binding site for residue SO4 B 301 |
鎖名 | 残基 |
B | ASN188 |
B | HIS190 |
B | CYS247 |
B | THR248 |
B | GLY249 |
B | ARG253 |
site_id | AC4 |
残基数 | 3 |
詳細 | binding site for residue SO4 B 302 |
鎖名 | 残基 |
B | ASN188 |
B | ARG253 |
C | THR150 |
site_id | AC5 |
残基数 | 5 |
詳細 | binding site for residue SO4 C 301 |
鎖名 | 残基 |
A | THR235 |
C | HIS190 |
C | CYS247 |
C | THR248 |
C | GLY249 |
site_id | AC6 |
残基数 | 6 |
詳細 | binding site for residue SO4 C 302 |
鎖名 | 残基 |
A | TYR220 |
A | ARG223 |
C | ARG101 |
C | LEU102 |
C | HIS103 |
C | ASN109 |
site_id | AC7 |
残基数 | 9 |
詳細 | binding site for residue SO4 D 301 |
鎖名 | 残基 |
B | THR235 |
D | HIS190 |
D | CYS247 |
D | THR248 |
D | GLY249 |
D | GLY250 |
D | LYS251 |
D | HIS252 |
D | ARG253 |
site_id | AC8 |
残基数 | 6 |
詳細 | binding site for residue SO4 D 302 |
鎖名 | 残基 |
B | TYR220 |
B | ARG223 |
D | ARG101 |
D | LEU102 |
D | HIS103 |
D | ASN109 |
site_id | AC9 |
残基数 | 4 |
詳細 | binding site for residue SO4 D 303 |
鎖名 | 残基 |
D | ARG95 |
D | MET139 |
D | SER140 |
D | VAL141 |
site_id | AD1 |
残基数 | 5 |
詳細 | binding site for residue SO4 D 304 |
鎖名 | 残基 |
D | GLY11 |
D | SER12 |
D | GLY13 |
D | LYS14 |
D | SER15 |
site_id | AD2 |
残基数 | 9 |
詳細 | binding site for Di-peptide SO4 B 303 and LYS B 14 |
鎖名 | 残基 |
B | SER7 |
B | GLY8 |
B | GLY11 |
B | GLY13 |
B | SER15 |
B | VAL16 |
B | ALA17 |
B | LEU18 |
B | ASP56 |
site_id | AD3 |
残基数 | 12 |
詳細 | binding site for Di-peptide SO4 C 303 and LYS C 14 |
鎖名 | 残基 |
C | VAL6 |
C | GLY8 |
C | ARG9 |
C | SER10 |
C | GLY11 |
C | SER12 |
C | GLY13 |
C | SER15 |
C | VAL16 |
C | ALA17 |
C | LEU18 |
C | ASP56 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
site_id | SWS_FT_FI1 |
残基数 | 8 |
詳細 | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00636 |
鎖名 | 残基 | 詳細 |
A | GLY8 | |
A | ASP56 | |
B | GLY8 | |
B | ASP56 | |
C | GLY8 | |
C | ASP56 | |
D | GLY8 | |
D | ASP56 |
site_id | SWS_FT_FI2 |
残基数 | 4 |
詳細 | MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842 |
鎖名 | 残基 | 詳細 |
A | LYS251 | |
B | LYS251 | |
C | LYS251 | |
D | LYS251 |