9ZDO
Crystal structure of Zn-substituted rubredoxin from psychrophilic clostridia Clostridium psychrophilum
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2025-01-27 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.72929 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 27.477, 37.020, 40.715 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 27.390 - 0.842 |
| R-factor | 0.14035 |
| Rwork | 0.139 |
| R-free | 0.15774 |
| Structure solution method | SAD |
| RMSD bond length | 0.012 |
| RMSD bond angle | 2.240 |
| Data reduction software | autoPROC |
| Data scaling software | Aimless |
| Phasing software | HKL2Map |
| Refinement software | REFMAC (5.8.0430) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 27.390 | 0.953 |
| High resolution limit [Å] | 0.842 | 0.842 |
| Rmerge | 0.115 | 1.557 |
| Rpim | 0.040 | 0.604 |
| Number of reflections | 25522 | 1276 |
| <I/σ(I)> | 9.3 | 1.9 |
| Completeness [%] | 91.0 | 50.6 |
| Redundancy | 9.1 | 7.5 |
| CC(1/2) | 0.997 | 0.515 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | VAPOR DIFFUSION AGAINST 3.2M NA,K PHOSPHATE, pH 8.5, |






