Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9ZDM

RhsF/RhsFi complex from Chromobacterium violaceum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2023-09-14
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9763
Spacegroup nameP 1
Unit cell lengths34.831, 52.923, 66.390
Unit cell angles72.03, 86.91, 71.84
Refinement procedure
Resolution47.850 - 1.850
R-factor0.1917
Rwork0.190
R-free0.21940
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.013
Data reduction softwareXDS (5.15.9)
Data scaling softwareXDS (5.15.9)
Phasing softwarePHENIX (1.21_5207)
Refinement softwarePHENIX (1.21_5207)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.8501.970
High resolution limit [Å]1.8501.920
Rmerge0.087
Rmeas0.104
Rpim0.056
Number of reflections342231831
<I/σ(I)>6.8
Completeness [%]94.6
Redundancy3.4
CC(1/2)0.769
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62938.33 mg/mL protein complex; 83.3 mM NaCl; 67 mM MMT (malic acid, 2-(N-morpholino)ethanesulfonic acid); 16.7 mM Tris-Cl; 6.7% ethanol; 16.7% PEG1500; pH 6.0

256789

PDB entries from 2026-07-22

PDB statisticsPDBj update infoContact PDBjnumon