9YBW

ARID1B ARID bound to compound B-2 ((2M)-2'-(morpholin-4-yl)-6-oxo-4-(trifluoromethyl)-1,6-dihydro[2,3'-bipyridine]-5-carbonitrile)

This is a non-PDB format compatible entry.

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	ALS BEAMLINE 8.3.1
Synchrotron site	ALS
Beamline	8.3.1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2023-10-08
Detector	DECTRIS PILATUS3 S 6M
Wavelength(s)	1.11584
Spacegroup name	P 4 21 2
Unit cell lengths	90.320, 90.320, 37.740
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	63.870 - 1.880
R-factor	0.2047
Rwork	0.200
R-free	0.24510
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.011
RMSD bond angle	1.228
Data reduction software	autoPROC
Data scaling software	XSCALE
Phasing software	PHASER
Refinement software	PHENIX (1.21.2_5419+SVN)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	64.040	1.950
High resolution limit [Å]	1.880	1.880
Rmerge	0.123	2.067
Rpim	0.031
Number of reflections	13242	1273
<I/σ(I)>	13.5	1.2
Completeness [%]	99.7	99.22
Redundancy	16.28	15.61
CC(1/2)	0.999	0.592

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	6.5	277	10.7% PEG3350, 0.044 M zinc acetate, 0.025% w/v 3,5-dinitrosalicylic acid, 0.025% w/v 4-aminobenzoic acid, 0.025% w/v salicylic acid, 0.025% w/v trimesic acid, 0.002 M HEPES sodium, pH 6.8