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9Y9W

Vibrio cholerae protein FrhA peptid-binding domain and adjacent split domain (S1127-F1439) in complex with peptide AGWTD X-ray crystallography structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]80
Detector technologyCCD
Collection date2020-03-04
DetectorRAYONIX MX300HE
Wavelength(s)0.98400
Spacegroup nameP 1
Unit cell lengths61.273, 118.726, 118.706
Unit cell angles60.03, 85.62, 76.70
Refinement procedure
Resolution102.720 - 2.400
R-factor0.227
Rwork0.227
R-free0.23180
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.275
Data reduction softwarexia2 (3.21.1)
Data scaling softwareDIALS (3.21)
Phasing softwarePHENIX (1.21.2-5419)
Refinement softwarePHENIX ((1.21.2_5419: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]102.7402.240
High resolution limit [Å]2.2002.200
Rmerge0.1961.061
Rmeas0.212
Number of reflections1829866929
<I/σ(I)>1.410.6
Completeness [%]98.6
Redundancy7
CC(1/2)0.9910.700
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH92930.16 M calcium acetate, 0.08 M sodium cacodylate, and 24.4% (w/v) PEG 8000. Ethylene glycol was used as a cryoprotectant.

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PDB entries from 2026-04-01

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