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9XS5

Factor inhibiting HIF-1 alpha in complex with Mn(II) and morin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2025-03-26
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.00700
Spacegroup nameP 41 21 2
Unit cell lengths86.626, 86.626, 148.234
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.220 - 2.330
R-factor0.2163
Rwork0.213
R-free0.25180
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.670
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.2202.410
High resolution limit [Å]2.3302.330
Rmerge0.0470.556
Number of reflections430122319
<I/σ(I)>20.72.5
Completeness [%]95.797.3
Redundancy4.74.9
CC(1/2)0.9990.756
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72770.1 M HEPES-NaOH (pH 7.0), 4% (w/v) PEG 400, 1.6 M ammonium sulfate

258009

PDB entries from 2026-08-12

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