9WTJ
Crystal structure of HLA-A*11:01 bound to G12V-9 peptide(VVGAVGVGK)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL02U1 |
| Synchrotron site | SSRF |
| Beamline | BL02U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-12-28 |
| Detector | DECTRIS EIGER2 S 9M |
| Wavelength(s) | 0.97918 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.769, 72.133, 124.632 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 36.000 - 1.650 |
| R-factor | 0.2086 |
| Rwork | 0.207 |
| R-free | 0.23560 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.844 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 62.430 | 1.740 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmerge | 0.129 | |
| Rmeas | 0.134 | |
| Rpim | 0.036 | 0.828 |
| Number of reflections | 57085 | 8239 |
| <I/σ(I)> | 12.3 | 1.2 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 13.4 | 13.3 |
| CC(1/2) | 0.999 | 0.490 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 0.2M Magnesium chloride hexahydrate, 0.1M Tris pH8.5, 20%w/v PEG8000 |
