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9WJ4

Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with C14-Gly1-Gly2-Ser3-Ile4 lipopeptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B1
Synchrotron siteSPring-8
BeamlineBL26B1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-13
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths52.929, 82.017, 106.540
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.010 - 2.040
R-factor0.2025
Rwork0.201
R-free0.23610
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle0.998
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (2.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.160
High resolution limit [Å]2.0402.040
Rmerge0.0750.546
Number of reflections302542513
<I/σ(I)>17.23.88
Completeness [%]99.8
Redundancy8.9
CC(1/2)0.9980.921
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293100mM MES buffer, pH6.5, 20% PEG smear high

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