9VYV
Crystal structure of UPF0235 protein PF1765 from Pyrococcus furiosus at pH 4
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
| Synchrotron site | RRCAT INDUS-2 |
| Beamline | PX-BL21 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2025-04-01 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.978930 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 44.453, 59.347, 79.505 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 32.480 - 1.190 |
| R-factor | 0.1838 |
| Rwork | 0.183 |
| R-free | 0.20320 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 9unt |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.403 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 44.450 | 1.210 |
| High resolution limit [Å] | 1.190 | 1.190 |
| Rmerge | 0.045 | 0.193 |
| Rmeas | 0.048 | 0.212 |
| Rpim | 0.014 | 0.086 |
| Number of reflections | 64647 | 2126 |
| <I/σ(I)> | 36 | 5.8 |
| Completeness [%] | 95.1 | 64.1 |
| Redundancy | 12.4 | 5.1 |
| CC(1/2) | 0.998 | 0.971 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | BATCH MODE | 4 | 294 | 0.1 M PCB buffer pH 4, 25% PEG 1500 |






