9VFO
Crystal Structure of the NUAK1-MARK3 kinase domain chimera bound with small molecule inhibitor 2-amino-N-(5-((5-chloro-4-(((3R,3aR,6R,6aR)-6-methoxyhexahydrofuro[3,2-b]furan-3-yl)oxy)pyrimidin-2-yl)amino)-2-((2-(dimethylamino)ethyl)(methyl)amino)phenyl)acetamide
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.3 |
| Synchrotron site | ALS |
| Beamline | 5.0.3 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2025-05-10 |
| Detector | DECTRIS EIGER2 S 9M |
| Wavelength(s) | 0.979168 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 45.405, 116.184, 160.558 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.063 - 2.500 |
| R-factor | 0.187585297345 |
| Rwork | 0.182 |
| R-free | 0.23711 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.950 |
| Data reduction software | XDS (20250119) |
| Data scaling software | XDS (20250119) |
| Phasing software | PHENIX (1.9_1692+SVN) |
| Refinement software | PHENIX (1.9_1692+SVN) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.070 | 2.589 |
| High resolution limit [Å] | 2.500 | 2.500 |
| Rmerge | 0.230 | 1.699 |
| Number of reflections | 15072 | 1400 |
| <I/σ(I)> | 10.42 | 1.65 |
| Completeness [%] | 94.8 | 94.79 |
| Redundancy | 11 | |
| CC(1/2) | 0.996 | 0.673 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.5 | 293.15 | 0.1M MES pH 6.5, 25% PEG 8000 and 0.2M (NH4)2SO4 |






