Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9V4G

Prenyltransferase Ord1 wild type

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-30
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.04500
Spacegroup nameP 1
Unit cell lengths59.000, 72.210, 84.190
Unit cell angles86.04, 69.50, 90.02
Refinement procedure
Resolution44.400 - 2.100
R-factor0.2324
Rwork0.229
R-free0.24590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Initial phase from Se-SAD model
RMSD bond length0.004
RMSD bond angle0.675
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwarePHENIX (1.19.2.4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.220
High resolution limit [Å]2.1002.100
Rmerge0.0630.523
Number of reflections7427211833
<I/σ(I)>10.582.25
Completeness [%]97.696
Redundancy3.23.4
CC(1/2)0.9980.774
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52910.1 M Bis-Tris,pH 5.5, 0.2 M Ammonium sulfate, 25% PEG 3350

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon