9U7U
5hmC specific restriction endonuclease Escherichia coli APEC O1 PD-T4-3
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-04-04 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1 |
| Spacegroup name | P 64 2 2 |
| Unit cell lengths | 123.332, 123.332, 82.932 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 38.655 - 2.194 |
| R-factor | 0.2236 |
| Rwork | 0.222 |
| R-free | 0.25830 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.834 |
| Data reduction software | HKL-3000 (7.21) |
| Data scaling software | HKL-3000 (7.21) |
| Phasing software | PHASER (2.7.0) |
| Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.655 | 2.330 |
| High resolution limit [Å] | 2.194 | 2.194 |
| Rmeas | 0.101 | |
| Number of reflections | 19546 | 3087 |
| <I/σ(I)> | 33.73 | |
| Completeness [%] | 99.9 | 99.5 |
| Redundancy | 35.23 | |
| CC(1/2) | 1.000 | 0.668 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.9 | 293.15 | 0.49 M Sodium phosphate monobasic monohydrate, 0.91 M Potassium phosphate dibasic pH 6.9 |






