Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9TCD

XFEL structure of oxidised Ribonucleotide reductase R2a Y122F mutant from E. coli, hexagonal P6122 form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSLAC LCLS BEAMLINE MFX
Synchrotron siteSLAC LCLS
BeamlineMFX
Temperature [K]297
Detector technologyCCD
Collection date2021-07-12
DetectorRAYONIX MX340-HS
Wavelength(s)1.304826
Spacegroup nameP 61 2 2
Unit cell lengths93.508, 93.508, 203.591
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution22.780 - 2.700
R-factor0.2237
Rwork0.220
R-free0.25380
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.618
Data reduction softwarecctbx.xfel
Data scaling softwarecxi.merge
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]22.7802.790
High resolution limit [Å]2.7002.700
Number of reflections14829137
<I/σ(I)>20.592.27
Completeness [%]97.9
Redundancy1011.86
CC(1/2)0.9900.930
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE2974M Sodium Formate

253795

PDB entries from 2026-05-20

PDB statisticsPDBj update infoContact PDBjnumon