Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9SH9

Thermus thermophilus asparaginyl-tRNA synthetase dimer with bound ATP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM1A
Synchrotron siteESRF
BeamlineBM1A
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1996-12-14
DetectorMAR scanner 300 mm plate
Wavelength(s)0.87
Spacegroup nameP 65 2 2
Unit cell lengths124.954, 124.954, 246.821
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution24.474 - 2.950
Rwork0.204
R-free0.22750
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.886
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareREFMAC (5.8.0430)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.4743.026
High resolution limit [Å]2.9502.950
Rmerge0.1050.271
Number of reflections233821440
<I/σ(I)>9.32
Completeness [%]94.5
Redundancy7.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP288Native crystals grwon with protein 5 mg/ml, 12-15 % PEG 6000, 0.3M KCI at pH 8.4 Crystal soaked in 5 mM ATP and 10 mM MgCl2 for several hours, crystal phase change to new space-group with dimer in asymmetric unit. Cryoprotectant 30% glycerol

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon