9S33
Crystal structure of inhibitor-bound Helicobacter pylori urease
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-2 |
| Synchrotron site | SSRL |
| Beamline | BL9-2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-04-09 |
| Detector | MARMOSAIC 325 mm CCD |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 21 2 21 |
| Unit cell lengths | 168.360, 181.970, 186.280 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.360 - 1.950 |
| R-factor | 0.1386 |
| Rwork | 0.137 |
| R-free | 0.17470 |
| Structure solution method | MIR |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.905 |
| Data reduction software | HKL-3000 |
| Data scaling software | Aimless (0.5.31) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.390 | 10.000 |
| High resolution limit [Å] | 1.950 | 8.000 |
| Rmerge | 0.200 | 0.053 |
| Rmeas | 0.240 | 0.063 |
| Rpim | 0.110 | 0.028 |
| Number of reflections | 374751 | 9834 |
| <I/σ(I)> | 5.9 | |
| Completeness [%] | 91.3 | |
| Redundancy | 3.7 | |
| CC(1/2) | 0.980 | 0.997 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.5 | 294 | 0.1M MES, pH 6.5 25-30% Jeffamin M-600, pH 7.0 |






