Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9RZY

X-ray structure of the alpha-L-fucosidase MfAlfDGH29 from Mariniflexile fucanivorans bound to L-fucose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-01-25
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9801
Spacegroup nameP 1 21 1
Unit cell lengths96.370, 111.527, 117.434
Unit cell angles90.00, 97.13, 90.00
Refinement procedure
Resolution58.260 - 2.300
R-factor0.2079
Rwork0.206
R-free0.24320
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.583
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwarePHENIX (1.20rc3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]64.4002.420
High resolution limit [Å]2.3002.300
Number of reflections10942315871
<I/σ(I)>5.5
Completeness [%]100.0
Redundancy7.1
CC(1/2)0.9860.671
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29325% (w/v) PEG 3,000 200 mM Magnesium formate 100 mM HEPES pH 7.5

258009

PDB entries from 2026-08-12

PDB statisticsPDBj update infoContact PDBjnumon