Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9R1O

X-ray crystal structure of a de novo designed 1,6-diphenylhexatriene and Nile red binder, sc-apCC-6-DPH-NR

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2024-06-22
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9763
Spacegroup nameP 1 21 1
Unit cell lengths58.699, 59.583, 64.307
Unit cell angles90.00, 96.29, 90.00
Refinement procedure
Resolution45.660 - 3.230
R-factor0.2548
Rwork0.254
R-free0.27900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.001
RMSD bond angle0.312
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.6603.346
High resolution limit [Å]3.2303.230
Number of reflections7013655
<I/σ(I)>3.471.42
Completeness [%]97.093.84
Redundancy1.81.8
CC(1/2)0.9950.619
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62930.01 M zinc chloride, 0.1 M MES pH 6.0, 20 % w/v PEG 6000

257629

PDB entries from 2026-08-05

PDB statisticsPDBj update infoContact PDBjnumon