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9QVI

Central domain of Glucan Water Dikinase-1 in alternative closed conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-05-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.8856
Spacegroup nameP 43 21 2
Unit cell lengths94.134, 94.134, 150.757
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.111 - 3.250
Rwork0.261
R-free0.30610
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.959
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.8903.430
High resolution limit [Å]3.2503.250
Rmerge0.0460.749
Number of reflections112581578
<I/σ(I)>51
Completeness [%]100.0
Redundancy12.7
CC(1/2)0.9990.966
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2850.1 M HEPES Na salt pH 7.5, 0.7 M tri-Na citrate

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PDB entries from 2026-06-10

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