Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9QQY

Dye-decolourising peroxidase DtpB XRPP experiment (1000 kGy)-PUMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSACLA BEAMLINE BL2
Synchrotron siteSACLA
BeamlineBL2
Temperature [K]293
Detector technologyCCD
Collection date2022-11-24
DetectorRAYONIX MX300-HS
Wavelength(s)1.1264
Spacegroup nameP 21 21 21
Unit cell lengths87.054, 122.576, 200.237
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.050 - 1.900
R-factor0.21737
Rwork0.215
R-free0.26108
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle2.048
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0430)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.0501.949
High resolution limit [Å]1.9001.900
Number of reflections16874911732
<I/σ(I)>5.9
Completeness [%]100.0
Redundancy94.8
CC(1/2)0.9140.250
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE7.52916.2 mg/mL of protein in 20mM Sodium phosphate, 150mM NaCl pH 7 was mixed with 125 mM MgCl2, 125 mM HEPES, 20% PEG 4000 pH 7.5

257629

PDB entries from 2026-08-05

PDB statisticsPDBj update infoContact PDBjnumon