9QL8

Structure of Rhyzopertha dominica dihydrolipoyl dehydrogenase variant S425G at 1.3 angstrom resolution

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron site	PETRA III, EMBL c/o DESY
Beamline	P14 (MX2)
Temperature [K]	100
Detector technology	PIXEL
Collection date	2024-09-06
Detector	DECTRIS EIGER2 X CdTe 16M
Wavelength(s)	0.97625
Spacegroup name	P 21 21 21
Unit cell lengths	66.914, 91.828, 143.059
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	71.530 - 1.300
R-factor	0.1424
Rwork	0.141
R-free	0.17340
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.008
RMSD bond angle	0.999
Data reduction software	XDS
Data scaling software	XSCALE
Phasing software	PHENIX
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	71.530	1.330
High resolution limit [Å]	1.300	1.300
Rmeas	0.080	1.770
Number of reflections	215447	15860
<I/σ(I)>	22.6	2.16
Completeness [%]	99.7	99.8
Redundancy	13.4	13.1
CC(1/2)	1.000	0.510

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP		293	Tris, Magnesium chloride, PEG3350, Formamide