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9QJ9

Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to Trim16 IR1 Response Element

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-09-10
DetectorDECTRIS PILATUS 6M
Wavelength(s)1
Spacegroup nameP 41 21 2
Unit cell lengths56.019, 56.019, 169.871
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.842 - 3.500
R-factor0.2702
Rwork0.267
R-free0.33520
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.014
RMSD bond angle2.315
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_1426)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.8423.625
High resolution limit [Å]3.5003.500
Number of reflections3712317
<I/σ(I)>11.7
Completeness [%]96.5
Redundancy2
CC(1/2)1.0001.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29020% PEG 1000, 0.2M MgCl2 0.1M NaCl, 0.05M Na cacodylate pH6.5

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