Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9QDP

De novo designed enzyme for Morita-Baylis-Hillman reaction MBH2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2025-02-05
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.967697
Spacegroup nameC 1 2 1
Unit cell lengths56.775, 51.881, 72.606
Unit cell angles90.00, 112.27, 90.00
Refinement procedure
Resolution36.750 - 1.170
R-factor0.1355
Rwork0.134
R-free0.16400
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.749
Data reduction softwareautoPROC
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.7501.190
High resolution limit [Å]1.1701.170
Number of reflections706272675
<I/σ(I)>9.83
Completeness [%]96.893.17
Redundancy3.1
CC(1/2)0.9960.407
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.15PEG3350, Ammonium acetate, Bis-Tris, Hepes

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon